Gene Snas_4986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4986 
Symbol 
ID8886193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5293996 
End bp5294529 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513716 
Protein GI291302438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.207268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0734509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTCCG TTGGTCTGGT CTGTGGTGTC GCCTCTCCCA TCGTGGCCAA GGAGGGGGAG 
AAGTGGATCG CGGCCGGAGC GTTCCTGGTG CTCATCACCG TGGGCTGCGA CCGGCTCTAC
TCGATGGCGG TGTCCCCTGT GGTGCAGGCC AGCCGCCGCA GCCTCGTCTT CGTGCCGCTG
TCGGCCCGGC TCACCGAAGC GGCGTGGCTG TACGGATTCT GGAAGCTCGG GGTGCCGCCC
GGAGTGGTCA TCGCCGCCGG GGCGCTCTCC TTGGGACACG AGTACATCCG GGCCCGGGGC
CAGATCGCCG GGCTGCGCGA CATCGGCATC TCCACTTTGG GCGAACGTCC GGGACGGGCA
CTGACGGCGC TGGCCGGTTA CGGCGTCTCG GGCGCGGTGG CGCTGACGTC CACGTCGATG
ACGGCGGGGC TGACGACCGG CATCCTGACG ATGGCGGCCA CCGCCTGGCT GCTGCTGGCG
GTGCTCGGTT TCGTACAGCT GGCGATCGTG TTGTCGGCTG CGCTGCGCAA ATAG
 
Protein sequence
MVSVGLVCGV ASPIVAKEGE KWIAAGAFLV LITVGCDRLY SMAVSPVVQA SRRSLVFVPL 
SARLTEAAWL YGFWKLGVPP GVVIAAGALS LGHEYIRARG QIAGLRDIGI STLGERPGRA
LTALAGYGVS GAVALTSTSM TAGLTTGILT MAATAWLLLA VLGFVQLAIV LSAALRK