Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4888 |
Symbol | |
ID | 8886095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5191992 |
End bp | 5192633 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | lipoate-protein ligase B |
Protein accession | YP_003513622 |
Protein GI | 291302344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.368944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGACA CGCGCGCCCG GACGCTCAAG ATCGACAGAC TCGGTACCGT CGACTATGCG CGGGCCTGGG ATCTGCAGAA AGACCTCCAG GACAAGCGCA TCAACGACGA GATCGACGAC ACGGTGCTGC TGTTGGAGCA TCCCAGCGTC TACACCGCGG GCCGCCGCAC CGAGAAGTGG ACCTACCCCG ACGACGGCAC CCCGGTGGTC GAGGTGGACC GGGGCGGCCA GATCACCTGG CACGGTCCCG GCCAGCTGGT CGGCTACCCG ATCGTCAAGC TCACCAAGCC CATCGACGTC GTCAAGTACG TGCGCCGCGT CGAGGACATG CTGATGGCGG TGTGCGGCGA GTTCGGCGTC GCCACCACCC GGATCGACGA CCGCACCGGA GTGTGGATCC CGGCCGACGA CCGCGGCCCG GAGCGCAAGA TCGCCTCCAT CGGTGTGCGG GTCCGCTGGG CGGTGACCCT GCACGGCTTC GCGCTCAACT GCGACAACGA CATGTCCTTC TTCGACCACA TCGTCCCGTG CGCGATCATG GACAAGGACA TGACCTCGCT GAGCCGTGAG ACCGGCCGCG ACGTCACCGT CGACGAGGTC ATCCCGGTGA CCGAGAAGCA CATGCACCTG ATCCTGGACT GA
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Protein sequence | MSDTRARTLK IDRLGTVDYA RAWDLQKDLQ DKRINDEIDD TVLLLEHPSV YTAGRRTEKW TYPDDGTPVV EVDRGGQITW HGPGQLVGYP IVKLTKPIDV VKYVRRVEDM LMAVCGEFGV ATTRIDDRTG VWIPADDRGP ERKIASIGVR VRWAVTLHGF ALNCDNDMSF FDHIVPCAIM DKDMTSLSRE TGRDVTVDEV IPVTEKHMHL ILD
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