Gene Snas_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4840 
Symbol 
ID8886047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5137781 
End bp5138884 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513574 
Protein GI291302296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCA AATCCGCGCG ACGTCGCTTC GCGGTTCCGA TCGCGCTGGC GGCCGGGATC 
GTGACCGCCG CGGCTGGTAC CGGGATCGTC TCGGCCAGCG GTGCCAGTGA CCTGCCGGAC
CGCTCGGCGG CCCAGCTGCT GGAGGACGTC CAGAACTCCG ACATCGAGGG CCTGTCGGGA
ACGGTCGTGC AGAACGCCAA CCTGGGGCTT CCCAGCCTGG GGCAGTCGGG TGGCGGGCTG
ACGCAGCTCG CCGACGGCTC CAACCAGATG CGGGTCTGGT ACGCCGCGCC CGACAAGATG
CGCACCGCCG TGCTCAGCGA CTACGGCGAG TCCGACACCA TCCGCAACGG CGAGGACGTG
TGGACCTGGA ACAGCGAGGG CGGCGAGGCC ACCCACTACA CGCTGCCCAA GAAGGCCGCC
GACGCGCCGC TGTGGCCGCC GTCCGAGATG GGCGGCGCCG ACCCGGCCAA GGCGGCCGAG
CAGGCGCTGA AGGCCATCGA ACCGACCACG AAGGTGTCCA CCAGCCAGCC GGTCGAGGTG
GCCGGACGCG ACGCCTACGA ACTGGTCCTG GAACCCAAGG ACGGCGAATC GCTCGTTGAC
CGGGTGACGC TGGCCATCGA CGCCGAGCAC GGAGTGCCGC TGCGCACCCA GGTGTACTCC
GACGACGAGA AGGAAGCCGC CTTCGACATC GGCTTCTCGC GGGTCGACTT CGGCACGCCC
GACAAGGAGA ACTTCACCTT CACCGCCCCC AAGGGCGTCA CGGTGACCGA GGGAACCGAC
GAGCTGAGCG ATTTCCTCTC CAACGGCAAG AAACCGGCCG CGGACGCCGA CGTCAAGGCG
GTCGGCAAGG GCTGGACCAC CGTGCTGACG GGTGAGTTCG ACCTGAAGGA ACTGTCCAAG
GAAACCAAGA AGAAGGCCAA ACACGGCGGC GAGAGCGTCG ACCTGGAGAA GGTGCTCAAG
CAGCTGCCGG AGGTCTCGGG GAAATGGGGT TCGGGACGGC TCTTCGAGTC GAAACTCGTC
AACGCGCTCC TGACCGACGA CGGCCGCTTC TACATCGGCT CGGTGACACC CGAGCGGCTT
TACGAAGTGG CGGACGGCAA GTGA
 
Protein sequence
MSRKSARRRF AVPIALAAGI VTAAAGTGIV SASGASDLPD RSAAQLLEDV QNSDIEGLSG 
TVVQNANLGL PSLGQSGGGL TQLADGSNQM RVWYAAPDKM RTAVLSDYGE SDTIRNGEDV
WTWNSEGGEA THYTLPKKAA DAPLWPPSEM GGADPAKAAE QALKAIEPTT KVSTSQPVEV
AGRDAYELVL EPKDGESLVD RVTLAIDAEH GVPLRTQVYS DDEKEAAFDI GFSRVDFGTP
DKENFTFTAP KGVTVTEGTD ELSDFLSNGK KPAADADVKA VGKGWTTVLT GEFDLKELSK
ETKKKAKHGG ESVDLEKVLK QLPEVSGKWG SGRLFESKLV NALLTDDGRF YIGSVTPERL
YEVADGK