Gene Snas_4838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4838 
Symbol 
ID8886045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5135969 
End bp5136829 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513572 
Protein GI291302294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTGC TTGAGGCCAC CGAGACCGCC ACGGAGGGTC GGCCGCGCCG TCGGCTGCTG 
TACGCCGAAC TGCGGTTGAT GTCCGGCCGG ACCCGCAACC TGGTCGGGCT GGCCATCCTG
TGCGCCATCC CGATCGTGCT GGCGATCATC CTGGCCGTCA CCCGCCCGAC CGGCGGGGGC
GACGGGCAGG CGCCGCCGTT CTTCTCGATC CTGTACGGCA ACGGCCTGTT CGTGGTGCTG
ACGAGCCTGA TGATGGAGAT GACGATCTTC CTGCCGATGG CGGTCTGCAT CCTGGCGGGC
GACTCCATCG CGGGCGAGGC CAACGTCGGC ACACTGCGGT ACCTGCTGAC CGCCCCGGTG
GGGCGCACCC GGCTGCTGTC GGTGAAGTTC GCCTCGCTGG TCATCGGCGC GATCGTGGGC
GTGCTGGCGG TCGCGGTCAC CGCCGCGATC ATCGGACTGT CGCTGTTCGG CGCCGGGGAG
ATGCTGACCC TGTCGGGCAC CACGCTGAGC TTCGGCGAAT CCATCGGACG GGTCGCGCTG
GTGTGCGGCT ACGTGATGGC GATGCTGGTC AGCGTGTGCG CGGTGGCGCT GTTCGCCTCC
ACGCTGACCG AACAGCCGAT CGGCGCGGCC GTGGGCACGC TGATGTGGAT CATCCTGCAC
CAGATCCTGA CCAGCCTGGA CGCGCTGTCG TGGCTGCACC CGTTCCTGCA GACCACCTAC
TGGGCCAACT GGAGCGGCCT GATGCGCGAC CCCGTCGAAT GGGGCGGCGT CGGCGTCGGA
CTGCTGTCGG CGCTGGCCTA CACGCTGGTC TTCGGCTCGG CGGCCTGGGC GCGCTTCACC
ACCAAGGACA TCACGTCGTA G
 
Protein sequence
MSVLEATETA TEGRPRRRLL YAELRLMSGR TRNLVGLAIL CAIPIVLAII LAVTRPTGGG 
DGQAPPFFSI LYGNGLFVVL TSLMMEMTIF LPMAVCILAG DSIAGEANVG TLRYLLTAPV
GRTRLLSVKF ASLVIGAIVG VLAVAVTAAI IGLSLFGAGE MLTLSGTTLS FGESIGRVAL
VCGYVMAMLV SVCAVALFAS TLTEQPIGAA VGTLMWIILH QILTSLDALS WLHPFLQTTY
WANWSGLMRD PVEWGGVGVG LLSALAYTLV FGSAAWARFT TKDITS