| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4751 |
|---|
| Symbol | |
|---|
| ID | 8885957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5050967 |
|---|
| End bp | 5051797 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_003513486 |
|---|
| Protein GI | 291302208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0264271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0594951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAG AAGCAATTTT TCCGCGCCGA GTACTCGGCG AGACCTTCAA ACGATTCCGT
CAAGCCAAAG GCTGGTCCGT GAATGGGGCG GCCAGGCAGC TTGGCGTATC ACGGGACAGG
CTGAAGAACA TCGAGGACGG CAGCTCGCGA CTGGCCATCG TGGATATTGT GGGTATATGC
CGGATTTACG GGACATCTCA GGCGGAAGAG CAGGAACTCA TCGCGTTGGC CGAGGCTACG
ACCAAGTACC GCTGGGTCGA GCAATACGGG CAAGGCATTC CGCAATACGC GCAGAAGTTC
GTGAGCATGG AACAGCGCGC GACGCGCATG TTGATATACG AAGCCGAGTT CGTGACTGGA
CTGTTCCAAA CCCCCGAATA TCTACGCGCC AGCCACGCGC GCGACCATCG CTACAACGCG
AAGTCCTCGG AAGAAATCAT CGCGGCGCGG TTGGCTCGCC AACGAGCGCT GGCCAAGAGC
GACAATCCGC CCCAGATCAG CGTGATTTTC AGCGAGGGGG TTCTCCGACG AATGACGAGC
ACCCCCGAGA TCATGACCGA TCAAGTCGAG CGGCTGCGCA AGGCCAACCG GCTCGCTTAC
GTCGACATCG CGATCTTGCC GTTTGACGCT GGTGTGCATC CGTCCATGTC AGGGCCATAC
ATCGTGCTGG ACTTCGCCGA CGACGAGCCG TCGGTGGTCT ACATCGAGTC CCGTGACGGC
TGCCGATATG AAACTGGCCC CGACACAGTG GCGCTGTATC GTCAAGACTT TAGCGAGACC
TTGCCGCTTA CAGCACCACT GGAGGAGATC AAATATGGGA CCGTGGCGTA A
|
|---|
| Protein sequence | MASEAIFPRR VLGETFKRFR QAKGWSVNGA ARQLGVSRDR LKNIEDGSSR LAIVDIVGIC
RIYGTSQAEE QELIALAEAT TKYRWVEQYG QGIPQYAQKF VSMEQRATRM LIYEAEFVTG
LFQTPEYLRA SHARDHRYNA KSSEEIIAAR LARQRALAKS DNPPQISVIF SEGVLRRMTS
TPEIMTDQVE RLRKANRLAY VDIAILPFDA GVHPSMSGPY IVLDFADDEP SVVYIESRDG
CRYETGPDTV ALYRQDFSET LPLTAPLEEI KYGTVA
|
|---|
| |