Gene Snas_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4682 
Symbol 
ID8885888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4992483 
End bp4993205 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513418 
Protein GI291302140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.581923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0667429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA TCCCGATCAC CGCGCGGGCC GCCTTCCGGC TCGACCTGCG ACTGCAGTGG 
CGCTACGGCT TCGTCTACGC GGCGGCGTTC TCGGCGGTGC TGTGGGACGC CATCGTGATC
ATCCTGCCCG AGCCACTCCA GGGACCGGCG ATGCCGTACC TGATCTTCGG CGACCTGGGC
ATCGTCGGTT TCTTCTTCCT GGCCGGGGCG GTGTTCTTCG AACGCGGGGA ACGCACCCTG
GACGCGGTGG TGACCACACC GATGCGGTTC GGTGACTACC TGGCATCCAA ACTGACGACA
TTGAGCCTGC TGAGCCTGGT GCTGACCCTC CTCATCACGG TCTCCGGAGT CGGTCTCGAC
TTCGACCCGG TGACTCTCTT GCTGGGGACG GTCCTGTGCT CACTGGTGTG CCTGCTGGCC
AGTTTCATCT CCGCGACTCC GTTCACGTCG ATCAGCGACT GGATCATCCC GTCCACCGCC
GTGATCGCGG TGCTGAGCCT GCCGATGGCG TTCTACTCCG GACTGTGGGA AAGTCCGGCG
CTGTACCTGG CGCCGACCCA GGGCAGTCTG CTGTTGCTCG GAGAGTCCTT CGGACAGTCG
CGGTTCGAGG TGTGGGACTA CGTCTACGCG ATCGGGTCCT CACTACTGTG GATCGTGCTG
CTGACACTGT GGGCGCGGCG GGCGTTCTAC CGCCACGTCG TGAAGCGGGA AGGGGGTCGC
TGA
 
Protein sequence
MSLIPITARA AFRLDLRLQW RYGFVYAAAF SAVLWDAIVI ILPEPLQGPA MPYLIFGDLG 
IVGFFFLAGA VFFERGERTL DAVVTTPMRF GDYLASKLTT LSLLSLVLTL LITVSGVGLD
FDPVTLLLGT VLCSLVCLLA SFISATPFTS ISDWIIPSTA VIAVLSLPMA FYSGLWESPA
LYLAPTQGSL LLLGESFGQS RFEVWDYVYA IGSSLLWIVL LTLWARRAFY RHVVKREGGR