| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4611 |
|---|
| Symbol | |
|---|
| ID | 8885816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4919129 |
|---|
| End bp | 4920385 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003513347 |
|---|
| Protein GI | 291302069 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.226025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0491359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTGT CCAGAGTCCT CACCTTCGCG GCCGCCGCGG CGCTGGCCGC CGTCGCGGTC
GCGGTGCCGT CGATCGCGCA GGCCGAGGAA GCCGATCCGG TGATCGATCA CGCGGTGTTC
AACAACCCCA CCGGCACCAC GGCGGAGAAG TACGCGATCT TCATCCAGTT CGGACGGCTT
ATCGACCGGG TGCCGGCCGG GGAGACGATC TCGATGTCGT TCTTCGGCCT GGACAAGGTC
ACCGACTCCG ACTCGCCCGA CACCCCTGAC CTGACCGCGA AGCTCGTCGC CGCCCACGAG
CGCGGCGTCA AGGTCCGGAT CATCACGGAC AACGGCAACG TCGGCAACGA CGCGTGGAAC
AAACTCACCG CCGCCCTGGG CACCGACGAC AGCAAGGGCA GCTGGATCGT CCACTGCTCC
GACAAGTTCG CCGACAACCC GGATCGCGGC TGCATCGGCA CCCGCGTGAA GGAGTGGTCG
AACGGGCCGC TGTACGCCTA CAACCACAAC AAGTTCGCCA CCTTCTCGGC CGTGAAGATG
AACGGCGGCA GCACGGCGTC CAACGTGGTG TTCACCGGTT CGTCCAATAT CGGCAGCTGG
GACGCGGTGA CCGCCTTCAA CAACATGTTC ACCTTCTCCG ACGAGCCCGG GTACAAGATC
TTCGAGAAGT ACTTCGAGGA CCTGCGCGTC ACCCGCTCCA GCGCCGAGGG GAACAACAAC
TACTACACCG ACACCGGCTC GACCTCGAAG TACCGGATGT TCTTCTTCCC CCGGCACGAA
CGCTCCGGCC AGCCCTTCGA GGATCCCGGC AGCGATACCG TCTACAACAC GCTGCAGTCG
GTGGACCCCA GCTGCAAGTA CCAGGAACCC GACGGCTCCT GGCACCAGAC CGACGTGCGG
GTGGCGATGC TGGCGTTCAA CCGCCCCGCG ATCGCCCAGA AGCTGGCGCA GCTGAAGAAG
AACGGCTGCT GGATCGACGT CGTCTACAGC TCCGCCAACG CCGACGTCCT CAACGCGCTG
TCGGGCATCC AGACCACGAA GTGCCAGGGT GCCCTGCGGG TGCACTCCAA GTACATGCTC
ATCGACGGCG GCTTCGACGA CGACATCACG CCCCGCGTCT ACACCGGCAG CCACAACTAC
GCCTGGTCGG CGCTGCGCCA GTCCGACGAG ACGCTGGTGC GCATGACGGG CCGCGAGCTG
CACACCGAAT ACCTGAACAA CTTCTACGAC ACCCGCACGG CCTGCAAGGC CAGCTGA
|
|---|
| Protein sequence | MRLSRVLTFA AAAALAAVAV AVPSIAQAEE ADPVIDHAVF NNPTGTTAEK YAIFIQFGRL
IDRVPAGETI SMSFFGLDKV TDSDSPDTPD LTAKLVAAHE RGVKVRIITD NGNVGNDAWN
KLTAALGTDD SKGSWIVHCS DKFADNPDRG CIGTRVKEWS NGPLYAYNHN KFATFSAVKM
NGGSTASNVV FTGSSNIGSW DAVTAFNNMF TFSDEPGYKI FEKYFEDLRV TRSSAEGNNN
YYTDTGSTSK YRMFFFPRHE RSGQPFEDPG SDTVYNTLQS VDPSCKYQEP DGSWHQTDVR
VAMLAFNRPA IAQKLAQLKK NGCWIDVVYS SANADVLNAL SGIQTTKCQG ALRVHSKYML
IDGGFDDDIT PRVYTGSHNY AWSALRQSDE TLVRMTGREL HTEYLNNFYD TRTACKAS
|
|---|
| |