| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4589 |
|---|
| Symbol | |
|---|
| ID | 8885794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4901119 |
|---|
| End bp | 4902432 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | putative FHA domain-containing protein |
|---|
| Protein accession | YP_003513326 |
|---|
| Protein GI | 291302048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.878687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.04785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGTACG AACCGAACCA ACACGACGAC AACGTCACGC CCGATAATAT GGTGCGTTCG
CGATTCGGCA CGCCCCGTAT CGGCAAGAAC GGCTCCGGGC CGTCCAAGAT CCCCGAGCAG
TACCGGTTCT CGGCCGAGCA GCCCGGCACC ACCGCGGAGG AACTGACCAT CGACGGCGAC
TTCACCTCGG GTTCCGGCCC TGACGCGCCC CCGCCACCGC CCCGGCGGGT CAGCCCGCCG
CCGTCGCGGC GTCTCCTTTC GCCGAATAAC GAACCGCCGC AGCAGGCCCA ACAGCAGCCG
CACCCACAAC AGCCTCCTCA GCCTCAGCAG CCGCAACAAC CACCGCAGCC CCAGCAGCAA
CCGCAACACC CGCGGCAACA ACCGCCACAA CGTCCCGACG CCCGGCACAT CGCCCCGCCG
GAGTCCCCCG AGGCCGCTGG CAAGCGGGTC TCGCGCGCCG AGCGGCGCCG GGCGGCCGAA
CAGTCGACCG ACGAGGACGA CTACGCCACC ACCCACAGCG CCGACCTGTC CCGCATCGCC
AGTTTCCTGC GCAGTACCCA GCAGGAACAG GCCGAGCCCA CTCCGCCGCC CCCGGCCGAG
CTCGACGACC CCCATGCCGA AGAAAAGACC TCGGAGCTTC CCACAGTGAC CCCCGACGCC
CCCACCTCCA CACCCGTGTT GACCAGTGAG GCGGTGCTGT CCGCCGTGAG ACAGGTCCCC
GGGGTGGCCG GGGCCCGGCT CAACGAGGCC GACAACAAGC TCGCGCTCGA GATCGCCGAC
GGCGCCGACA CCGACGCCGT CCACCGCGAC GTGGTCGCGG TGCTGGACAG CCACCTGGGA
GTACGCGCCC GCCCGGCCAA GGCGCCGGTG GCGGCCGTGG AACCGGAACC GCCCCGCGAA
CCGCAGCGCC CGCCCAAGAT CCAGCAGAGC GGCCGGGTGA TGCTGGAACG CACCCAGGTC
ATCACCTCGG GCTTCGAGTC CACCGTCGAG GTCGGCCTGA CGGTCAACGG CACCCGCGCC
GTCGGCCGCG CCAGCGGCCC GGCCGTCGAC CGGCACATCC TGCGCAGCGC CGCCGAAGCC
ACAGTGGACG CTGTCGGCGT GCTGGTCGGC AAGAACGCCC GCGTCGTCGT CGAGAGCGCC
ACCATCACCG AGACCGGCGC CGGACGCGTC GCCGTCGTGC TGGTGCTGCT GTTGACCCAG
GCCGGTTCGG AGCAGCTGGC CGGTGCCGCG CCCGTCGACT CCGACCGCCG CCAGGCTGTC
GTGCACGCCA CCCTCCAGGC CCTCAACCGG CGCCTGGAGA CCATGCTTAC CTAA
|
|---|
| Protein sequence | MVYEPNQHDD NVTPDNMVRS RFGTPRIGKN GSGPSKIPEQ YRFSAEQPGT TAEELTIDGD
FTSGSGPDAP PPPPRRVSPP PSRRLLSPNN EPPQQAQQQP HPQQPPQPQQ PQQPPQPQQQ
PQHPRQQPPQ RPDARHIAPP ESPEAAGKRV SRAERRRAAE QSTDEDDYAT THSADLSRIA
SFLRSTQQEQ AEPTPPPPAE LDDPHAEEKT SELPTVTPDA PTSTPVLTSE AVLSAVRQVP
GVAGARLNEA DNKLALEIAD GADTDAVHRD VVAVLDSHLG VRARPAKAPV AAVEPEPPRE
PQRPPKIQQS GRVMLERTQV ITSGFESTVE VGLTVNGTRA VGRASGPAVD RHILRSAAEA
TVDAVGVLVG KNARVVVESA TITETGAGRV AVVLVLLLTQ AGSEQLAGAA PVDSDRRQAV
VHATLQALNR RLETMLT
|
|---|
| |