Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4583 |
Symbol | |
ID | 8885788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4890571 |
End bp | 4893693 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | UvrD/REP helicase |
Protein accession | YP_003513320 |
Protein GI | 291302042 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.542582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCG TGAGTGCGTC TGGGTACCGG TTTGTGACGC GTCCGGCATA CGAACGACCG GACGCGACGG CTTTCGCGCC CGATGTCGCG CAGGCCACGG TCGTGGAGCA CCGGGACGGG CCGCTGCTGG TCCAGGGTGG ACCCGGTACC GGGAAGACCG CGGTGCTGGT CGAGTCGGTG GCCGCCCGGG TGAAAGAGGG CGTCGACCCC GCCGACATGC TGGTGCTGGG TTTCGGCAGG CGCGGCGCCG CGCGGTTGCG GCGCGACATC TCGGCCCGGC TGGCCCGCAC CGGTTCCGAG GTGCCGGTGT ACAGCTTCCC GGCGCTGGCC TTCGCGGTCC TGCGGGCCGC CGCCAACCGG CACGACGCAC CGGCGCCGCA GCTGCTCAAG GGACCCGAGC AGGACGTCAT CATCCGGGAG CTACTGGCCC ACGACGCGGT GGAGTGGCCC GAGGCGGTGC GGCCCGCGCT GGGCACCCGG ACCTTCGCCG CCCAGCTGCG GGACCTGCTG CTGCGGGCCA CCGAGCGCGG CATCTCGGCG CCCCGGCTGG CCCGGTTGGG GCGCGAACAC GACCGTCCCG AGTGGGTGGC CGCGGCCGAC TTCATGACCC GGTACGTGGA CGTGCTGGCG CTGCGGTCGC TGACCGGCGG CGCCACCTAC GACTCCGCCG AGATCGTGCG GGCCGCCGCC AGTGAGCTGG CCGACGATCC CGAGCTGGTC CCGCCGCCCA AGTTCACCTT TGTGGACGAG GTGCAGGATC TGGACCCGGC GCAGCTGGAG CTGTTGCGGC TGGTGGCAGG GCAGGGCGCC AACCTGGTGG CCTTCGGCGA CGCCGACTCG GCGACCTTCG GGTTCCGGGG CGCCGACGTG CGGCTGCTGC GCGAGTTCGG TGACCGCTTC CCCACCGCTG ACGGCGATCC GGCGCCGGAG GTGAACCTGG CGACCTGCCA CCGCAGCGCC TCGGCGCTGT TGAACGCCAC CTCGCTGGTG GCCAAGAAGC TGCGCGGCAC CGACAGGTTC CGGGCCCGCG CGCCCCGTCC CGAGGTCGGC GCCGGACAGG TGGAGGTCGC GGCGCTGCGC TCGGCGGCGC AGCAGGCGGC CTATATCGCG CGGCAGCTGC GGGTGGCGCA CCTGCGCGAG GGCGTGGCCT GGTCGCAGAT GGCGGTGATC GTGAAGTCGG CGGCCGAGCA TCTGCCGGTC GTCGAGCGGG CGCTTAGGCA CGCGGGGGTG CCGGTGGAGA TCGCCGCGAT CGACCAGGCG CTGTCGGCGC GGCCCATCGT CCGGCACCTG CTCACCATCA TCCAATGTGG CCTGAATCCG AAGTCGCTGG ACGAGGACAC CGCGGTGGCG CTGCTGCACT CGGTGTACGG CGGCGCCGAC TCGCTGTCGG AACGGCGGCT GCGCCAGGAG CTGCGGCGCC TGGCCCACGC CGCCGACGTG TTCCGCTCGC CGGGGGAACT GCTGGTGGAG GCGCTGCGCG ACCCGGCCGA GCTGACCGCG CTGCCCGAGG AGCCGTGGGC CGAGCCGCCG CGCCGGATCG CCGGGCTGAT GGAGTGCGTC CGCTCCGCGA CCGGCAGCGT CGAGGACGTG CTGTGGGCGG TGTGGGAACG GGCCGACCTG TCGCGGCGGC TGGCCCGGCG GGCGGTGTCG CGGGACTCGC GGGCGGTGGC CGCCGACGGC GACCTGGACG CGATGATGAC GCTGTTCGAC TGGGCCGCCG ACTTCGCCGA CCGGCTGCCG GGCGCCGGCG CTGACGTGTT CGCCGCGCAC GTCCTGGAAC AGGTGCTGCC CGCCGACACC CGGGCCGCGC AGGCCCGGCG CGGTGAGACC GTACAGCTGC TGACGGCGCA CTCGGCCAAG GGATTGCAGT GGGACCTGGT CGTGGTGGCC GGGGTGCAGG AGGGCACCTG GCCCAACCTG CGGCCGCGAG GCTCCATCAT GGGCTCCGAG GCCCTGGTCG AGACCGTCAC CTCCGGCACC GTCGTGGACA CGATGACACT GCTGCTGGAC GAGGAACGGC GACTGTTCTA TGTGGCCGCG ACCCGGGCCC GGGACCGGCT CATCGTCACC TGCGTCGCCG ACGAGGACGA GAACCAGCCC AGCCGCTTCA TCGAGGAACT GGGCATCACC GTGGAGCGTC CGGCCCGGCT GGAACGCCCG ATGACCCTGC CGAGCCTGGT CGCCGAGCTG CGGCTGGCCG CCTGCGGCCC GGCCGGGCGA CGCAAGGACG CCGCGATCGC GCAGCTGTCG GTACTGGCCA AGCAGGCGGT GCCCGGCGCC GACCCGGAGG AGTGGTGGGG ACTGCGGCCG ATCTCGGACC ACGCGCCGCT GATCCTGCCG GGCGAACGGG TCAAGGTCTC GCCGTCCACG GTGGAGCTCG TCGAGCAGTG CGGGCTGCGG TGGATGCTGG AACGGCACGG CGGCACCGAA CCGTCCGGGC TGCCGCAGGA GATCGGCAAC CTGGTGCACG CCGCCGCCGA GGCCGCGGCC GTCACCGACG ACCCCCGGCA GGCCATGGCC GACTTCGTGG CCCAGCACCT GGCCAAGCTG CCCTTCGAGG CACCCTGGAA GGCCAAACAG GACTCCGAAC GGGTGCGTTC CATGGTGGAC AAGTTCGCGT CCTGGCTGGA GAGCAACAAC CGCGACCTGG TCGCGGCCGA GAAACGGTTC ACCGTCAAGC TTCCCGACGG GCCGCCCGGT GTGACCACCG AACTGTCCGG CGCCGTCGAC CGACTGGAAC GCGACCTGCA CGGACGCCTG CACGTCGTCG ACATCAAGAC CGGCAAGACC CCGATCTCGG CCGCCGAGGC CGAGACCAAC CCCCAACTGG CGGCCTACCA GGTCGCCGTC GAGGCCGGGG CCTTCGCCGA ACACGGCCTC GAGGCCGGTG GCGCCACCCT CGTCTACCCG GCCAGCTCCA CCAAGGCCGC CTCGGTGCGG GAACAGCCCG CACTGCCCAG TGTCGACGAC CCCAGCTGGG CGCATCGCAA GGTGCTCAAG GTCGCCGAGA CCATGACGGC CTCCACCTTC ACCGCCGTCA ACACCCGCAA GTGCGACACC TGCGCGGTGA AACAGTGCTG CCCGATCAGC GGCAAGGGCG AGGCGGTGAC GAAACGTGAC TGA
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Protein sequence | MARVSASGYR FVTRPAYERP DATAFAPDVA QATVVEHRDG PLLVQGGPGT GKTAVLVESV AARVKEGVDP ADMLVLGFGR RGAARLRRDI SARLARTGSE VPVYSFPALA FAVLRAAANR HDAPAPQLLK GPEQDVIIRE LLAHDAVEWP EAVRPALGTR TFAAQLRDLL LRATERGISA PRLARLGREH DRPEWVAAAD FMTRYVDVLA LRSLTGGATY DSAEIVRAAA SELADDPELV PPPKFTFVDE VQDLDPAQLE LLRLVAGQGA NLVAFGDADS ATFGFRGADV RLLREFGDRF PTADGDPAPE VNLATCHRSA SALLNATSLV AKKLRGTDRF RARAPRPEVG AGQVEVAALR SAAQQAAYIA RQLRVAHLRE GVAWSQMAVI VKSAAEHLPV VERALRHAGV PVEIAAIDQA LSARPIVRHL LTIIQCGLNP KSLDEDTAVA LLHSVYGGAD SLSERRLRQE LRRLAHAADV FRSPGELLVE ALRDPAELTA LPEEPWAEPP RRIAGLMECV RSATGSVEDV LWAVWERADL SRRLARRAVS RDSRAVAADG DLDAMMTLFD WAADFADRLP GAGADVFAAH VLEQVLPADT RAAQARRGET VQLLTAHSAK GLQWDLVVVA GVQEGTWPNL RPRGSIMGSE ALVETVTSGT VVDTMTLLLD EERRLFYVAA TRARDRLIVT CVADEDENQP SRFIEELGIT VERPARLERP MTLPSLVAEL RLAACGPAGR RKDAAIAQLS VLAKQAVPGA DPEEWWGLRP ISDHAPLILP GERVKVSPST VELVEQCGLR WMLERHGGTE PSGLPQEIGN LVHAAAEAAA VTDDPRQAMA DFVAQHLAKL PFEAPWKAKQ DSERVRSMVD KFASWLESNN RDLVAAEKRF TVKLPDGPPG VTTELSGAVD RLERDLHGRL HVVDIKTGKT PISAAEAETN PQLAAYQVAV EAGAFAEHGL EAGGATLVYP ASSTKAASVR EQPALPSVDD PSWAHRKVLK VAETMTASTF TAVNTRKCDT CAVKQCCPIS GKGEAVTKRD
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