Gene Snas_4535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4535 
Symbol 
ID8885740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4839132 
End bp4839650 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513273 
Protein GI291301995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.551299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.636463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATAA CGCAAGTCCG CGCCTTGATC GTCGTGGGAG TCCTCATACT GATCGCGGTG 
TCGACATCGT GGTACGCGAT CGCGAACGAC TCCCAGACGG CGGCAGGCCG CGAGAATTGC
GAGCCCGGTG ACATACCGGT CGACGTCACG CTGCCCGAAC CCCACCAAGT CAGCGTGAAG
GTCCTCAACG CCACCAACAC CTCCGATCTG GCCGGTTCGG CCGCCGGATC GCTGAAGGAG
TACGGCTTCA AGATCGAGGA CACCGGTGAA TCCAAAAAGG ATGAGGGCAA GAGTTCGGTA
GAGATCCACT ATGGCCCGAA GGCGCTGGGC GGTGGGCATC TGCTGCGTTC CTACTTCGCC
GACGACACCG CCGTCTTCGA CCTGAAGAAC GAGAACGACT TCGTCGAGAT CATCCTGTTC
GACGGGTTCC AACAGGTCAA CACCGAAAGC GACGCTCGCA ACGAGGTCGG CATCATCGGC
CGCCCGGAAG CCCCCGAAGG AACCTGCGCG ATCGAGTAA
 
Protein sequence
MRITQVRALI VVGVLILIAV STSWYAIAND SQTAAGRENC EPGDIPVDVT LPEPHQVSVK 
VLNATNTSDL AGSAAGSLKE YGFKIEDTGE SKKDEGKSSV EIHYGPKALG GGHLLRSYFA
DDTAVFDLKN ENDFVEIILF DGFQQVNTES DARNEVGIIG RPEAPEGTCA IE