Gene Snas_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4529 
Symbol 
ID8885734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4835630 
End bp4836343 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513267 
Protein GI291301989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.325914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG AATCGCGCGT GCGAGCCGGA CTCGTCGACG ACGGCGGTGA ACCCCAGCCG 
CGTCCCTCAG CCCCACGCGA TGACGACGAC CTGCCGCCCA TGACCGAACA GGTCGCCCAG
CAACTGGGGG GAGTGCGGGG GCTGGTCGAA TCGGGCATCC CGGTCGGCGT CTTCGTCCTG
ATCAACGTGA TCTGGGAGGC CCTGTACTGG GCGATCGGCT TCGCCGTCGG CACGGCGGTG
GCCATCGCGG TGCTGCGGCT GATCCGCAAG GAGTCGATCC GGCACGCCGT CAACGGCCTG
TTCGGCATCG CGCTGGGCGC CTGGCTGGCC TGGCGCAGCG GCGACGAGGG CGACTTCTAC
TGGCCCGGCA TCATCCAGGG CCTGGCCTAC GCGGCCGTGC TCATGGGCTC GGTGGCGGTC
CGGCACCCGC TGGTGGGCTG GTTCTGGTCC ATCATCGCCG GAGGCGGCAA GCACGCCTGG
CGCGAGGACC GTCGCCTGGT GCGGGTCTTC GGCTGGCTGA CCATGCTGTG GGGCGTGGTG
TTCCTGGCCA AGAACCTGCT GCGGCTGTGG CTTCGCCTGG GCGACATGGA CACCGCGCTG
GGCGTGGTGA CCCTGGTCGG CGGCTACCCG GTGACTGGCC TGCTGATCCT GATCTCGATC
GCGGTCGTCC GCAAGACCCA CCCGGGAATG ACCCTCAAGC TGAAGGCCAG CTAA
 
Protein sequence
MSEESRVRAG LVDDGGEPQP RPSAPRDDDD LPPMTEQVAQ QLGGVRGLVE SGIPVGVFVL 
INVIWEALYW AIGFAVGTAV AIAVLRLIRK ESIRHAVNGL FGIALGAWLA WRSGDEGDFY
WPGIIQGLAY AAVLMGSVAV RHPLVGWFWS IIAGGGKHAW REDRRLVRVF GWLTMLWGVV
FLAKNLLRLW LRLGDMDTAL GVVTLVGGYP VTGLLILISI AVVRKTHPGM TLKLKAS