Gene Snas_4498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4498 
Symbol 
ID8885703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4796419 
End bp4797090 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID 
ProductHAD-superfamily hydrolase subfamily IA, variant 3 
Protein accessionYP_003513236 
Protein GI291301958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.511661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0143777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG GTGAACTGTC GGCCGTCCTG TTCGACATGG ACGGCACGCT CATGGACTCC 
GAGAAGCTGT GGGCCGTGGG CCTGCGCGAA CTGTGCCAGC GGCTGGGCGG CGAGCTGACC
AACTCGCTGC GGCTCCAGCT GGTGGGCATG GACCAGCGCG AGTCCATGGA GGTGGTGCAC
ACCGCCTTCG GGCTGCCGTT CTCCGGCATC GACGACAGCG CCGCCTGGCT GATCGGCCGG
ATGAAGGAGA TCTTCGCCGA CGGTGTGGTG TGGCGCCCCG GCGCCCAGGA ACTGCTGCAC
GAGGTCCGCT CGCGCGGCCT GGCCACCGCG CTGGTGACGG CCACCGGCCG CGAACTCGTC
GACGTCATCA TCGAGACTAT CGGCGCCCAC CACTTCGACG CCACCGTCGT GGGCGACGAG
GTCACCCACA ACAAACCCGA TCCCGAGCCC TACCTGACCG CGATGAAGAC GCTGCGGCTC
AGCCCCGCCG ACTGCCTGGC CATCGAGGAT TCCCCCACCG GAGTGGCCAG CGCCCACGCC
GCGGGCAGCC CGGTACTGGC GGTCCCCAGC GAAGTCCCGA TCCCGCCCCG CTCCGGGGTG
ACGGTGCTCG ACACCCTCGA CGGCGTCGAC GTGGAGCGGC TGCGCCACGT CCACGCCGAG
CTGTCCCGCT GA
 
Protein sequence
MPNGELSAVL FDMDGTLMDS EKLWAVGLRE LCQRLGGELT NSLRLQLVGM DQRESMEVVH 
TAFGLPFSGI DDSAAWLIGR MKEIFADGVV WRPGAQELLH EVRSRGLATA LVTATGRELV
DVIIETIGAH HFDATVVGDE VTHNKPDPEP YLTAMKTLRL SPADCLAIED SPTGVASAHA
AGSPVLAVPS EVPIPPRSGV TVLDTLDGVD VERLRHVHAE LSR