| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4482 |
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| Symbol | |
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| ID | 8885687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4780275 |
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| End bp | 4783100 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003513220 |
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| Protein GI | 291301942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.434883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.14218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCAAT TCCGGGTCCT GGGCCCGATG GAAGTCTGCT GTGATGGGCA AGTGGTGCCG
ACCGGCGGTG GCCGCAGTAA GGCCGTGCTG GCGGCACTTC TTTTGCACGC CAACAAAACC
GTCTCCCGGC CCCGGCTGAT CGAGCTGGTG TGGGCTGACG CCCCCGACTC CGTCGACTCC
AACCTGCGCA GCTACCTGGC GAAACTGCGC AAGAAGCTGC ACATCCCCGG CGAGGACGCC
TCCCGGCTGG TCGCCGACCC GCACGGCTTC CGGGTCGTGG TCGACGAGGG TGAGCTCGAC
CTGGCCGAGT TCGACGCGCT GGCCAGCCGG GGCGAACAGG CCCTGGCCGC CGAGGATCCC
GCCACCGCCG CCGACTGCTT CACCCGGGCG CTGGCCCTGT GGCGGGGACC GGCGTTGGGC
GGCGTCCTGG TGGAACCCAA CCTGGCCGCG GCTGTCGCGC ACGTCGAGGA ACGCCGCGAA
CACATCGAAC TGCGCAACTT CGAGGCCCGG CTGGCCCTGG GACAGCACGG CGAACTCATC
GGCGAACTGC GCGGACTGAT CTCGGCGAGG CCGCTGCGCG AGAAACCCGT CGCCCTGCTC
ATGCTGGCGC TGTACCGCTC GGGTCGCCAG AAGGAAGCCC TGGAGTTGTA CCGCCAGACC
CGGGCCCGGT TCCGCGACGA ACTGGGCTGC GACCCGGGCA AGAACCTGAC CGAACTGCAC
CGCCGCATCC TCAGCGCCGA CGCCGGACTG GACGCGCCCC GGCCCGCCGT CGCCGTGGCC
GCCGCCCCCG CCCGGGTGGT GCCGTCGCAG CTGCCCGCCG ACGTCCCCGC CTTCACCGGC
CGCCAACCGG AACTGGCCGC GCTGCGGCAG CTGTCCCGCG GCTGCCTGGA CGCCGAGGCC
GCCGGATCGG TGGTGGTGTG CGCCCTGGAC GGCATGCCCG GCATCGGAAA GACGACGCTG
GCCGTGCACG CCGCCCGGCT GCTGGCCCCC GACTTCCCCG ACGGCCAGCT GTTCTTGGAC
CTGCACGGTT TCAGCGGCGC CGGGGAACGC GTCGAACCCG GCGACGCCCT CGACCGGATG
CTGCGGGCGC TGGGCCTGGC CGTCGAGGAC ATCCCCGCCG AGGTGGAGGA CCGCGCGGCG
CTGTACCGCT CGCTGCTGTC CGACCGGCGG CTGCTCATCG TGCTCGACAA CGCCGCCGAC
GAGGCCCAGC TGCGGCCGCT GCTGCCCGGC GGCTCCCGCT GCCTGGTCAT CGTCACCAGT
CGCCGCCGGA TGTCGGCCCT GGACGAGGTC ACCCCGATCC CGCTGGACGT CATGAGCGCC
GACGAGGCCA CGGCGCTGTT CCTGGACGCC GCCGCGACCA CCGGACTCGA CGACACCGCG
GCGGGCATCG TCGCCGAGGT CGTCGAGACC TGCGGACGGT TGCCGCTGGC GGTGCGGATC
GCCGCCGCCC GGCTGCGCAG CCGTCCCAAC TGGACCCTGG CCGACCTGCG CGACCGGCTG
GCCCGCGACG GCGAACTGCT GTCCAAACTC GAGTTCGGGC AGCGCAGCGT CCGGGTCGCC
TTCGAGATGT CCTACCGGGA ACTGGACGAA CGGCACGCCC ACCTGTTCCG GCTGCTGGGC
CTGGCGCCCG GCTCCGACCT GTCGGTGGGC GCGGTGTGCG CGCTGTTGGG CGAGGCGGCC
GCCCACGAGG TCGAGACCCG GCTGGAGGAC CTGGTCGACG CCCACCTGCT GCGGTCCCGG
CGGCCCGGAC GCTACGCGTT CCACGACCTG CTGCGCGCCT ACGCCGTCAA CCTCACCGAG
TCCACCGACC CCGCCGAGCT GCGCGCCGAG GCGGTGGAGC GCATCGTCGA CTACCACGTC
CACACCGCGC ACCGGGCGAC GCTGCGGCTG GACCCGCTGC GGCGCGTCAC CCCGCTGCCG
CCGCTGCACG ACGCCGTCAA ACCCGCCGAG TTCGTCGACA GCCGCGCCGC CCGGGACTGG
TTCGACGAGG AACTGGCGAC ACTGAAGGCG GTGCTGCGAC TGACCGAGAC GCGGCGACTG
GACGAGTCGA CCTACCAGCT GGTGTGGGCG ATGGAGACCT ACCTGAGCCG CCGGGGCCTG
TGGGCCGACT GGGAACGGTT CCAGCGGCAG GCCATCGCCG CGGCCGAGCG ACTGGGCGAC
CTGCCCCGGC AGGCCTACGC GCACCGGGTG CTGGGCCGTC CGCTGACCCA GCTGAGCCGC
TACCCCGAGG CCTGCGCCGA GTTCAGCAAG GCCGTGGCGC TGTTCAAGCA GCTCGACGAC
CCGGTCGGGC AGGCCGACTC GCACCGGGGC CTGGCCTGGG CGTACTCCCG CACCGGCGAC
CGGCAGCGCG GCCTGGAGAA CGTCATGGAG AGCCTGGTCC TGTACCGCAA GGCCGGGAAC
CAGCGCCGGG TCGCGCACGC CCTCAACGGC GTGGGCTGGC AGCACGCCCT GGCGGGGGAG
TACCCGCAAA CCCTCGACTA CTGTGGACAA GCGATCGAGA TCTTCGCCGA ACTCACCAAA
CAGCACGGTC ACCACGACGC CCACGCCGAG GCCGAGACCT GGGACAGCCT CGGCTACGCC
CACCACCATC TGGGCAACCA CACCGAGGCC ATCACCTGCT ACCGCACCGC CTTGGACCTG
CTGGAGGACG TCGAGGACCG GTACTTCACC ACCGAGGTGC TCACCAACCT CGGCGACGTG
TACCTGTCCG AGGACGACCG CGACGCCGCC CGCCGGGTGT GGAGCCAAGC GCTGACCACA
CTGGACGAGC TCGGGCATCC GTACGCCGAC AAGGTTCGCA GCCGACTGGC GACACTGGAC
GAATGA
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| Protein sequence | MLQFRVLGPM EVCCDGQVVP TGGGRSKAVL AALLLHANKT VSRPRLIELV WADAPDSVDS
NLRSYLAKLR KKLHIPGEDA SRLVADPHGF RVVVDEGELD LAEFDALASR GEQALAAEDP
ATAADCFTRA LALWRGPALG GVLVEPNLAA AVAHVEERRE HIELRNFEAR LALGQHGELI
GELRGLISAR PLREKPVALL MLALYRSGRQ KEALELYRQT RARFRDELGC DPGKNLTELH
RRILSADAGL DAPRPAVAVA AAPARVVPSQ LPADVPAFTG RQPELAALRQ LSRGCLDAEA
AGSVVVCALD GMPGIGKTTL AVHAARLLAP DFPDGQLFLD LHGFSGAGER VEPGDALDRM
LRALGLAVED IPAEVEDRAA LYRSLLSDRR LLIVLDNAAD EAQLRPLLPG GSRCLVIVTS
RRRMSALDEV TPIPLDVMSA DEATALFLDA AATTGLDDTA AGIVAEVVET CGRLPLAVRI
AAARLRSRPN WTLADLRDRL ARDGELLSKL EFGQRSVRVA FEMSYRELDE RHAHLFRLLG
LAPGSDLSVG AVCALLGEAA AHEVETRLED LVDAHLLRSR RPGRYAFHDL LRAYAVNLTE
STDPAELRAE AVERIVDYHV HTAHRATLRL DPLRRVTPLP PLHDAVKPAE FVDSRAARDW
FDEELATLKA VLRLTETRRL DESTYQLVWA METYLSRRGL WADWERFQRQ AIAAAERLGD
LPRQAYAHRV LGRPLTQLSR YPEACAEFSK AVALFKQLDD PVGQADSHRG LAWAYSRTGD
RQRGLENVME SLVLYRKAGN QRRVAHALNG VGWQHALAGE YPQTLDYCGQ AIEIFAELTK
QHGHHDAHAE AETWDSLGYA HHHLGNHTEA ITCYRTALDL LEDVEDRYFT TEVLTNLGDV
YLSEDDRDAA RRVWSQALTT LDELGHPYAD KVRSRLATLD E
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