Gene Snas_4464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4464 
Symbol 
ID8885669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4762154 
End bp4763128 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003513202 
Protein GI291301924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.442858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGGC TGGTCACCGG GGGAGCCGGT TATATCGGTG GGCACGTGGT CCGGCGCATG 
CGGGCGCAGG GGTACCAGGT CGTCGTCTAC GACGACCTGT CGACCGGTGT CGCCGACCGG
GTTCCCGAGG GTGTTCCGCT GTGCGTGGGC AATCTGCTCG ACCGGGACGC GCTGACCGAC
GTCATGCGGA TCCACAACGT GACCGGGGTG GTGAACCTGG CCGCCCGCAA GTCGGTGCCC
GAGTCGACCA GCGACCCGAT GCTGTACCAC CGCGACAACG TCAGCGGTTT CATCGCGGTG
CTGGACGCGA TGAAGGACGC CGGGGTGCGG CACATCGTCC AGTCGTCCTC GGCGGCGATC
TACGGCGGCG CGCCGGGGCC GGTGCACGCT GAGATCACCC CGGCCGACCC GCTCAGCCCC
TACGCCACCA CGAAGCTGAT GGCCGAGCTG ATCCTCAAGG ACGCGGCCGC GGCCGGGCAC
CTGTCGTACC TGGCGCTGCG CTACTTCAAC CCGGTGGGGG CGCTGGCCCC GGAACTGGCC
GAGGTGGGCG GCGCGAACGT GTTCACGATC CTGTTCAACG CCATCGACTC CGGTGAGGTC
TTCGGGGTGA CCGGGGACGA CTTCGACACC CGCGACGGCA GCGGGCTGCG CGACTACATC
CACATCGAGG ACCTGGCCGA CGCCCACGTC GCGGCGGTGG AGTACATCAG CGGCCACGAG
GCCGGGGACG TCGTCAACAT CGGCACCGGA CGCGGCTACA CCGTCTTCGA GATGCTGGAG
GCGGTGCGCC AGGTGACCGG GCAGCCGGTG CCGCACAAGG TCGTCGACCG GCGTCCGGGC
GACGCGGCCG GCGCGGTGGC GGCGGTGGAG CGTGCCGAGC GGCTACTGGG CTGGCGGGCC
CGCTACGACC TGATGGACAT GGTCGACAGC GCCTGGACGA TGTGGCGGGC CCAGCGCGAC
GGCGTACCGG TGTGA
 
Protein sequence
MSWLVTGGAG YIGGHVVRRM RAQGYQVVVY DDLSTGVADR VPEGVPLCVG NLLDRDALTD 
VMRIHNVTGV VNLAARKSVP ESTSDPMLYH RDNVSGFIAV LDAMKDAGVR HIVQSSSAAI
YGGAPGPVHA EITPADPLSP YATTKLMAEL ILKDAAAAGH LSYLALRYFN PVGALAPELA
EVGGANVFTI LFNAIDSGEV FGVTGDDFDT RDGSGLRDYI HIEDLADAHV AAVEYISGHE
AGDVVNIGTG RGYTVFEMLE AVRQVTGQPV PHKVVDRRPG DAAGAVAAVE RAERLLGWRA
RYDLMDMVDS AWTMWRAQRD GVPV