| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4397 |
|---|
| Symbol | |
|---|
| ID | 8885598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4690229 |
|---|
| End bp | 4691203 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hydrolase transmembrane protein |
|---|
| Protein accession | YP_003513136 |
|---|
| Protein GI | 291301858 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.591103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCA AGCGCCTGGC GCTCGCGGTC CCGGCCCTGA TTCTGGGACT CGTCGTCGCC
CTGACCGCTT CGCCCGCCCA AGCCCGCCAG CCAGCGCCCG AACCCGACAC CCGCGCCGTC
GCGATCAAGA CGGCGCCCTA TATCGACATC ACCCGGCCGT CGCCGACTTT GCCCGAGGTC
GCCGCCGCCA CCGGCCAGAA GTACTTCACC CTCGCGTTCG TCCTGGGCTC GCACGCCGGT
TGCGCGCCCG CCTGGGGCGG CACCATCGAC CTCGACGAAC CCAGCATCAT CAACCAGATC
AACCAGCTGC GCGGCATGGG CGGCGACGTC ATCATCGCCT CCGGCGGCGC GCTGGGCCCG
TACCTGGAGC ACTCCTGCGG CAGCGCCACG GCGTTGTACG ACGCCTACGT CAAGGTGCTC
AACGCGACCG GCTCCAACCA TCTGGACGTC GACGTCGAGG CGTCGATCCC GCACTCGATG
GTCAACCAGG CGCTGAAGCG GCTGGTCGAC GAACGCGGCA CCACGATCAG CTACACGCTG
CGGGTGCAAG GCCAGGACTA CGGCCTGGAC CCGTATTCGG TGCAGATCCT CCAAGACGCG
AAGGCCAAGG GGCTGCGTCC GATCGTCAAC CCGATGCTGA TGAACTTCGG CTATTCGGGT
GACTGGGGTC AGGCCATGAT CTCGGCGGCG CAGGCGGTGA TCGGGCAGAT GAACCAGATC
TGGACCGGCG GCGGCAACGC CGTCTACCTG GGCATCACGC CGATGATCGG CCGCAACGAC
ACCGGCATGA CCACGACCCA GTCGCACGCC CGGGCGCTGC TGTCGTGGGC GAGGTCGAAC
AGCATCGCGT TCATCGGCTT CTGGTCGATC GGCCGTGACA ACGGCCGCTG CTCCGGCGGC
GGGGTGCGGC CCGACTGCAG CGGCATCAGC CAGTCCACCT ACGAGTTCAC GAACATCTTC
AAGGGCTTCG GCTAG
|
|---|
| Protein sequence | MPPKRLALAV PALILGLVVA LTASPAQARQ PAPEPDTRAV AIKTAPYIDI TRPSPTLPEV
AAATGQKYFT LAFVLGSHAG CAPAWGGTID LDEPSIINQI NQLRGMGGDV IIASGGALGP
YLEHSCGSAT ALYDAYVKVL NATGSNHLDV DVEASIPHSM VNQALKRLVD ERGTTISYTL
RVQGQDYGLD PYSVQILQDA KAKGLRPIVN PMLMNFGYSG DWGQAMISAA QAVIGQMNQI
WTGGGNAVYL GITPMIGRND TGMTTTQSHA RALLSWARSN SIAFIGFWSI GRDNGRCSGG
GVRPDCSGIS QSTYEFTNIF KGFG
|
|---|
| |