| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4358 |
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| Symbol | |
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| ID | 8885559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4643652 |
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| End bp | 4646258 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003513098 |
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| Protein GI | 291301820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0223815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0668738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCTCG GCGGTGTCCT CGCCGTGTCG TTGTCAGTGG CGGCGGGACG CGCGATATTT
GACGGTTCCC GGCACGCCGG GTTGTGGATC GCCTGCCTCG CCGTCGCGGC GGCGGTGGCG
GGCGGACTGG TATGGCGGGT CAGCGGTCCC CTGAAAACGG CGGTCGACCG TGCCCCGTAC
CGCCGACAGG CGGTCGCGTT GTATCTGGAG GCCGCCGGGG TGGCCATCGC GGTGATCGCC
GGTCGCGCGT ACGAATCCTG GATCATCGCC GTCACCGGCG TGATCGTCAT GAGTCTGTTC
GCGGTGGCGT TCGTGCGGGT CCCCGACGAC ACCGCGACCC CGGCCGCCCG GGTGCGGCGC
GGGCTGGACG GCCTGTTCAT CGCCGGTTGC GTCCTGTTCA GCCACTGGAT GCTGATGCCG
CCCGCCACCG CCGAGCGAGT GCTGGAGCAG TACTACCTGG TGCTCATACC GGCGGTCGCG
GCCACCGCGA TGGCCGGTAT CGGTGTTGTG GCGGTGATCC GGGCGACCGC GCACCGGCGC
CGCTACCTGT TGCTGGTGGG CAGCCTGAGC GTCGTGGCCG CCGCGCACGT GGGAGTCGTG
CTGGCCAGCG TCGGCGAACT GTCGATCTGG CAGTGCCGGA TGCTGGTGCT CGTGTGGGGC
GCGGGCTGCC TGGTGTCGGC GGGCGCGGCC TGGCTGGCCC GCCGCTTCCC CGGACCGGCC
ACGGCGGTGC CGCTGCCGCG CGTGGACGTG GCCGTGACGC TGGTGCCCGC GGTGGGCGCC
TCGGCGACGG CCCTGTACCA CGGTTACGTC GTCGGGCCGC TGGGCCCGGA CGCGATCATC
ACGGCCATGG CGGTCGTGGG GGTGCTGTCG GTGCGGCAGG TGCTGGCGCG CATCGACGTG
CGTCGCTACG CGCGGGTGCT GTCCGACCGC GAGGCCTACT ACCGGTCCAT AGTGTCCGGT
TCCTCCGATA TCACCACCGT CGTGGACTTC GACGGCCGGA TGCGGTTCCA GGCCGCCTCG
GCACCGTGGC GCTGCCACGC CGACCCCACC CGCATCAACG GCGTCCCGTT CACCGACATG
GTGCACCCCG ACGACGCCGC CACCGTGGAG CGGCAACTGA CGACGCTGGT CGCGGGCGAA
CCGGGGCAAC GCATCCGCAT CGACGCCCGC ATCAAGGACG CCGACGGCGA ATGGCGCGAC
ACCGAGTCCA TCGTGGCCGA CCAGCGCGAC AACCCGAAGG TCGACGGACT GGTCATCCGC
ACCCGCGACG TCGGGGAACG CCGCGCCCTG GAACGCGAAC TGGCCAAACT CGCCTTCACC
GATCCACTCA CGACGCTGTC CAACCGCCGG GCGCTGCTGC GGACCCTGGA GTCGGACGTG
GCGGGCGGCT CGATGCCGTG CACGCTGCTG GCCGTCGACC TGGACGGCTT CAAGAACGTC
AACGACACCC GCGGCCACGA CATCGGCGAC GCCGTGCTCG TCGAGGTCGC CAAGCGGCTG
CGGGAAAGCC TGCGCCCCAC CGATGTCGCC GCCCGGCTCG GCGGTGACGA GTTCGCGGTC
CTGCTGTGGT GCCCGCCCGA ACGCGGCTAC GAGATCGCCG AACGGCTGCT GGCGGTTCTG
GCCGAGCCCT ACCGTTTCGA CGGGCACGCC TCGGTGTTCC TGTCGTCCAG CATCGGCCTG
GCCGGTTGCG CCACCGCCGA CGACGTGCAG GCGCTGCTGC GCAACGCCGA CCTGGCGCTG
CGTTCGGCCA AACAGCAGGG CAAGAACCAG ATCGAGGCCT ACGACGAACT GTTCGAGAAA
CGGGTGCGGC GCCGCAACGT CCTGGAACAC GAACTGCACG GCGCCATCAA CCGGGGCGAG
CTCTACCTCG AGTACCAGCC GGTGATCTCG CTGCCGCACC GCCGGGTCGT GGGCGCCGAG
GCCCTGCTGC GCTGGCAGCA CCCCACCCTG GGCGCGGTCT CGCCCGGCGA GTTCATCCCG
GTCGTGGAGG ACGCGGGCCT GTCGTCCGAC CTGGCGACCT GGACGCTGGG GCAGGTCGCC
GAACGGCTCG CGGTCTGGAA GGCCGGGGGA CATCCGGCCT GGGTGTCGAT CAACCTGTCG
CCGAGGCAGC TGCACTCGCG GCTGTTCGCC ACCGACCTGG CCCAGGCACT GCTGTCCAAG
GGCGTGCCGC CGTCGCGGCT GGTCGTCGAG GTCACCGAAC ACGACGTCGC CCAGGACATG
GACATCCTGG TGGCCCAGCT CGGCGCGCTG CGCGGCACCG GCGTGCGCAT CGCGCTGGAC
GACTTCGGCG CGGGCTACTC CTCGCTGGGC CAGCTGCACC GGCTGCCTGT CGACATCCTC
AAGATCGACC GCGACCTGGT CGCCGGCAGC GACGAGGGCG CCGCCCCGCT GGCCGACGTC
GTGGTCCGCC TCGGCGAACG GCTGGGCCTG GCGGTGATCG CCGAGGGCGT CGAGACCGAA
ACCCAGTTGG ACGTCGTCAA GCAGGCCGGT TGCGCCATGG TCCAGGGCTA TCTGCTGGCC
CGCCCGATGG CCGTCGCCAA GATCGACGCC ATGCTGCGCG ATGACATCCG CCTCCACCAG
GCCCAACCGC TGGCCATCGA ATCGTGA
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| Protein sequence | MALGGVLAVS LSVAAGRAIF DGSRHAGLWI ACLAVAAAVA GGLVWRVSGP LKTAVDRAPY
RRQAVALYLE AAGVAIAVIA GRAYESWIIA VTGVIVMSLF AVAFVRVPDD TATPAARVRR
GLDGLFIAGC VLFSHWMLMP PATAERVLEQ YYLVLIPAVA ATAMAGIGVV AVIRATAHRR
RYLLLVGSLS VVAAAHVGVV LASVGELSIW QCRMLVLVWG AGCLVSAGAA WLARRFPGPA
TAVPLPRVDV AVTLVPAVGA SATALYHGYV VGPLGPDAII TAMAVVGVLS VRQVLARIDV
RRYARVLSDR EAYYRSIVSG SSDITTVVDF DGRMRFQAAS APWRCHADPT RINGVPFTDM
VHPDDAATVE RQLTTLVAGE PGQRIRIDAR IKDADGEWRD TESIVADQRD NPKVDGLVIR
TRDVGERRAL ERELAKLAFT DPLTTLSNRR ALLRTLESDV AGGSMPCTLL AVDLDGFKNV
NDTRGHDIGD AVLVEVAKRL RESLRPTDVA ARLGGDEFAV LLWCPPERGY EIAERLLAVL
AEPYRFDGHA SVFLSSSIGL AGCATADDVQ ALLRNADLAL RSAKQQGKNQ IEAYDELFEK
RVRRRNVLEH ELHGAINRGE LYLEYQPVIS LPHRRVVGAE ALLRWQHPTL GAVSPGEFIP
VVEDAGLSSD LATWTLGQVA ERLAVWKAGG HPAWVSINLS PRQLHSRLFA TDLAQALLSK
GVPPSRLVVE VTEHDVAQDM DILVAQLGAL RGTGVRIALD DFGAGYSSLG QLHRLPVDIL
KIDRDLVAGS DEGAAPLADV VVRLGERLGL AVIAEGVETE TQLDVVKQAG CAMVQGYLLA
RPMAVAKIDA MLRDDIRLHQ AQPLAIES
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