Gene Snas_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4340 
Symbol 
ID8885541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4629694 
End bp4630566 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID 
Product6-phosphogluconate dehydrogenase NAD-binding protein 
Protein accessionYP_003513080 
Protein GI291301802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.380878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CCCCGGTATC CGTCATCGGC CTGGGACGCA TGGGCGCCAC GATCGCCGAG 
ATCTATCTGC GCGAGGGGCA CCCCACCACG GTGTGGAACC GCACCCCGGC CAAGGCCGAA
CCACTGCTGG CCAAGGGGGC CCGACCGGCC GCGACGGTCG CCGAAGCCGT GGCGGCGAGC
CCCGTGTCGG TGATCATGCT CGCCGACGAC ACCGTCGTGC GCGCCAGCCT GGAGTCAGCG
ACGTCCGAAC TGGACGGCAG GACGATCGTC AACCTCACCA CCGGCCGCCC CGACGAGGCC
CGCGAGCTGG GCGACTGGCT GGCCGGACAC GGCGCCGAGT ACCTGGACGG CGGCGTGCTC
GGGGTGCCGC AGACGCTGGC CACCCCCGAG TCGGTGATCA TCTACAGTGG CTCGACCGCC
GCGAACCAGC GGCACGGCGA GATCGTCGCG GCGCTGGGGA CGGCCCGCTA CCTGGGCGCC
GACCACGGCC TGGCCTCGCT CAACGACATG GCGATCCTGT CCGGCATGTA CGGACTGTTC
TCCGGGTACT TCCACTCGGT GGCCATGGTG GACTCCGAGG GCTTCAAGGC CGCCGAGTTC
ACGAAGGACT TGCTCATCCC GTGGCTGCGA TCGATCGTCG ACGTGCTGCC GACACTGGCC
GACGAGATCG ACTCCGGCGA CTACCCCGTG AACTTTTCCA ATCTGGACGT CAACGTCGCC
GGGATCGAGA ACATCATGCG CACCAGTCGA TCCCAGGGTG TCACCGACGC TCCGTTGGTC
CCGCTGCGCG ACGCCCTGGC CGCGCAGCAG GAAAAGGGAC ACGGCGAGGC CAGCTTCTCG
CGCGCCGTCG AGGAGCTCAA GTCGTCCGAA TGA
 
Protein sequence
MTKTPVSVIG LGRMGATIAE IYLREGHPTT VWNRTPAKAE PLLAKGARPA ATVAEAVAAS 
PVSVIMLADD TVVRASLESA TSELDGRTIV NLTTGRPDEA RELGDWLAGH GAEYLDGGVL
GVPQTLATPE SVIIYSGSTA ANQRHGEIVA ALGTARYLGA DHGLASLNDM AILSGMYGLF
SGYFHSVAMV DSEGFKAAEF TKDLLIPWLR SIVDVLPTLA DEIDSGDYPV NFSNLDVNVA
GIENIMRTSR SQGVTDAPLV PLRDALAAQQ EKGHGEASFS RAVEELKSSE