Gene Snas_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4258 
Symbol 
ID8885459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4550426 
End bp4551280 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID 
Productphage shock protein A, PspA 
Protein accessionYP_003513000 
Protein GI291301722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0897975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATC CCTTTGCCAA GGGTTGGAAC TACATGATGG CGCTGTTCGG CGCCAAGATT 
GACGAGCACG CCGATCCGAA GATCCAGATC CAGCAGGCCG TCGAGGAGGC GCAGCGCCAG
CACCAGGCGC TGACCCGGCA GGCCGCCGCC GTCATCGGCA ACCAGCGGCA GCTGGAGATG
AAGCTGTCGC GGACGATGTC CGAGGTCGAG AAGCTGCAGT CCCAGGCGCG TCAGGCGCTG
GTGCTGGCCG ACAAGGCCCG CGCCGAGGGC GACGAGAAGA AGGCCACCGA GTACGAGAAC
ACCGCGCAGG TGCTCGCCGG TCAGCTGGTC TCGTCCGAGC AGTCCATGGA AGACATGAAG
TCCATGCACG ACCAGGCGAT CAGTGCCGCC GAGCAGGCAC GCCAGGCCGT GGAGAACAAC
CAGATGATCC TGCAGCAGAA GCTGGCCGAG CGCTCCAAGC TGCTGTCGCA GCTGGAACAG
GCCAAGATGC AGGAGACCAT CGCGTCCTCT CTGGAGTCGA TGTCCTCGCT GGCGGCGCCG
GGCAACGTGC CCAGCCTCGA CGAGGTGCGC GACAAGATCG AGAAGCGCTA CGCCACCGCG
ATGGGCCGCG CCGACCTGGC GGGCAACTCC GTCGAGGGCC GGATGATGGA AATCCAGAAG
GCCACAGTAG ACATGGCGGG CGCCTCCCGG CTCGAACAGA TCCGCGCCAG CCTCCAGGGC
GACAAGATCG GCGGCTCCGA CAAGACCGCG ATCGGCGGGG CCGAGGCCGA GGAGAAACCG
GCCAGCGTCT CCCGGCTGGA CGAGATCCGC GCCAGCCTGA GCAACGACAA GAACCGGGAC
GCCGCGGCGG GTTGA
 
Protein sequence
MANPFAKGWN YMMALFGAKI DEHADPKIQI QQAVEEAQRQ HQALTRQAAA VIGNQRQLEM 
KLSRTMSEVE KLQSQARQAL VLADKARAEG DEKKATEYEN TAQVLAGQLV SSEQSMEDMK
SMHDQAISAA EQARQAVENN QMILQQKLAE RSKLLSQLEQ AKMQETIASS LESMSSLAAP
GNVPSLDEVR DKIEKRYATA MGRADLAGNS VEGRMMEIQK ATVDMAGASR LEQIRASLQG
DKIGGSDKTA IGGAEAEEKP ASVSRLDEIR ASLSNDKNRD AAAG