Gene Snas_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4185 
Symbol 
ID8885386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4481966 
End bp4483228 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003512928 
Protein GI291301650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.236137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.28006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACACCA CCGTCGACAC CGCCCGCGTC CAGCGCTCCA CACTGAGACT GCTGTTCACC 
ACCCAGATCA TCGGCGGCGT CGGCGTGGCC GTCGGCATCG CCGTGGGCGC CCTGCTGCTG
GACGAACTCA CCGGCGGCGC CTCGCTGTCG GGGCTCGGCT CGGCCGCCAG CGTCATCGGC
GGCGCGCTGC TGACGATCCC GATCGTGCGC ATCACCAACC GCTTCGGCCG CCGCTACGGA
CTCACCTTCT CCTATGTCGT GGGCACCTTC GGATCGCTGG CGATCCTGGG CTCGGTGTAC
TGGAACTCCA TCCCGCTGGC CTTCTTGGGG ATGCTCGCCT TCGGCGGCGG CACCGCCGCC
AACCTCCAGG CCCGCTACGC CGCCGTCGAC CTCGCCGAAC CCTCCCGGCG CGGACGGCAA
CTGTCCATGG TGGTGTGGGC GACCACGCTG GGCTCCGTCT CCGGCCCCAG CCTCGCGCCG
CTGGCCGACC GGTACCTCAC CGACCTGGGC GCCCCCACCT ACGCCGGGCC GTTCCTCGCC
AGCGCCATCG GCTTCGCCGT CGCCGCGCTG ACACTGTGGA TACTGCTGCG GCCCGACCCG
TTCCTGCTGG CCCGCCGACT GCGCGACGAG TCCAACGGCG ACACGACCGG CAAAACCGCC
GCTCAGCCCG GCATCGCCCA CGGCTGGCGG GTCTACCGCA CCAACGCCGC CGCCCGCGTC
GGCGTCACCG CCGTGGCCCT GGGCCACCTG GTCATGGTCG CCGTCATGAC CATGACACCC
GTCCACATCA AACACGGCGT CAGCGACCCC GACCAGGTCA TCTCCATCGT GGGCATCATC
CTCAGTCTCC ACATCGCCGG GATGTACGCG CTGTCGCCCA TCGCGGGCTG GGCCGCCGAC
AAGTACGGTC CCCGCCGCGT CATCGGCTGC GGCATCGCGC TGCTGTTGGC CGCCTGCGCG
GTATCGGGCA CCGCCGGACA GTCGCACCCG CAACTGGCGA TCGGCCTGAT CCTGTTGGGC
CTGGGCTGGT CGGGCACCCT GGTCGGTGGA TCGGCGATGC TGACGGCCGC CGTGCCCGCC
GAGCAGCGGC CCGCGATCCA GGGACTGTCC GATCTGACCA TGGGCTGCGC CGGAGCGCTG
GCGGGCGGAC TGTCGGGCTT CATCGTCGAC GCCGCCGGAT ACCCCACCCT GGCGGCGGTC
GCGGCGCTGG TCGCGCTGCC GGTTACCGTG CTCGTGTTGA ACACCCGCGT CGAGGGGAAC
TGA
 
Protein sequence
MDTTVDTARV QRSTLRLLFT TQIIGGVGVA VGIAVGALLL DELTGGASLS GLGSAASVIG 
GALLTIPIVR ITNRFGRRYG LTFSYVVGTF GSLAILGSVY WNSIPLAFLG MLAFGGGTAA
NLQARYAAVD LAEPSRRGRQ LSMVVWATTL GSVSGPSLAP LADRYLTDLG APTYAGPFLA
SAIGFAVAAL TLWILLRPDP FLLARRLRDE SNGDTTGKTA AQPGIAHGWR VYRTNAAARV
GVTAVALGHL VMVAVMTMTP VHIKHGVSDP DQVISIVGII LSLHIAGMYA LSPIAGWAAD
KYGPRRVIGC GIALLLAACA VSGTAGQSHP QLAIGLILLG LGWSGTLVGG SAMLTAAVPA
EQRPAIQGLS DLTMGCAGAL AGGLSGFIVD AAGYPTLAAV AALVALPVTV LVLNTRVEGN