Gene Snas_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3980 
Symbol 
ID8885181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4250988 
End bp4251599 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512725 
Protein GI291301447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGA TCGTGCGAAC CGAGCGCGAA GCCCTGACCA CTCTGCTGAC GACCCTGGGC 
CCGCAGGCTC CGACCCTGTG CACCGGCTGG ACCACCGCCG ACCTGGCGGC GCACCTGGTG
GCCCGGGAAC GGCGGGCCGA CAGCCTGCCC GGCCTGATGG TGCCGCTGCT GGCGGGTCAC
ACCGAACGCG TCCGGCGCGG CTACCGCGAC CTGGACTACG ACAAGCTGCT GGACCTACTG
CGTCGGCCAC CCTGGTGGGC GCTGACCACC ACGATCGAAT CCTTCGACCT GGCAGAGTGG
TTCGTGCACC ACGAGGACGT GCGCCGAGCC GCCCCCGACT GGCAGCCCCG ACCGCTGCCC
CGCCCGTTCG GCGAGGCGCT GTGGGACAAA CCGTTCCTGA CCCAGGCGCT GCTGTTTCGC
ACCGGCTTCG CGGTCACGCT GGAGGCACCC GGCTACGGGC GCCGCACCGT CGGCCGGGGC
CCGTCGGCCG CGACGGTCAC CGGCGAGCCC GGCGAGATCC TGCTGTTCTG CTTCGGGCGG
CAGGCGCACG CGCGCGTCGA CGTCGAGGGC CGCAAGGCCG CGAAACTGCG CCGCGCGAAG
CTGGGGCTCT AG
 
Protein sequence
MSSIVRTERE ALTTLLTTLG PQAPTLCTGW TTADLAAHLV ARERRADSLP GLMVPLLAGH 
TERVRRGYRD LDYDKLLDLL RRPPWWALTT TIESFDLAEW FVHHEDVRRA APDWQPRPLP
RPFGEALWDK PFLTQALLFR TGFAVTLEAP GYGRRTVGRG PSAATVTGEP GEILLFCFGR
QAHARVDVEG RKAAKLRRAK LGL