Gene Snas_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3971 
Symbol 
ID8885172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4236371 
End bp4236910 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003512716 
Protein GI291301438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.437336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTT ATCCGTCACT TGCACCAGAG GCACAGATCT ACCAGTACTG CCCTAAGTGC 
ACTAAACCGT TGCGGGACTA TCGCGATCCG GTCAACGGGC AGTTGCGGCC GACGTGTGTG
GGGTGCGGCT GGGTGTACTA CCCGTGTAAT CCGCTCGCGG CGATCGCGGT GGTGGAGACC
GACGAGGGCA TCGTCATGAC CCATCCGGCG GGTGGGATGC CGCAGGCTCC GGCCTCGCTG
CCGGGTGACT ACATCGAGTA CGGCGAGACG CCGGAGTCCT GTCTGGCGCG GGCGGTGTGG
GAGCAGACCG GGTTCGAGGT GGAGACGGTG GCCGAGCTGG TGCGGTTCCT GCAGTTGGGG
ACGTCATTCG GGCCCGCGCT CATGTTCGGG TTTCGGGTGC GGGTCGTCGG GGGCAGGTTG
CGGACGGACG GGCCGGAGGG GCCAGCGGCG GTGTACCCGC TCAACGAGAT GCCCGCGCTG
ATTCCGGTGC GGCAGGCCAA TCGGCGGGTG ATGGACGCGT ATCTGGCCAC CCGGATCTGA
 
Protein sequence
MNGYPSLAPE AQIYQYCPKC TKPLRDYRDP VNGQLRPTCV GCGWVYYPCN PLAAIAVVET 
DEGIVMTHPA GGMPQAPASL PGDYIEYGET PESCLARAVW EQTGFEVETV AELVRFLQLG
TSFGPALMFG FRVRVVGGRL RTDGPEGPAA VYPLNEMPAL IPVRQANRRV MDAYLATRI