Gene Snas_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3953 
Symbol 
ID8885153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4218984 
End bp4220411 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content68% 
IMG OID 
ProductLysine 2,3-aminomutase 
Protein accessionYP_003512698 
Protein GI291301420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACC AGTTGACGGG CCAGCCGTAC GAATACAAGC GCACCCCCCT GGTCGAGCCC 
GACTGGCGAC GCTTCCCGGG CTGGGCCGAG GTCACCGAGG AGGAGTGGTC CAGCGCACAG
TGGCAGCGTG TCCATTGTGT CAAGAATGTG GCGCAGCTGC GCGGCGTCCT GGGTGACCGG
GTCGACGACG CCTTCTACGA CGACCTGGCC GCCGACGGCG ACAAGCGCGC CACCATGTCG
ATGCTGCTGC CGCCGCAGAT GCTCAACACG ATCGCGCCGA CGCTGGAGAC GACCGCGCCG
GGCTCGTGGA CCGAGGCGTA CTACGCCGAC CCGATCCGCC GCTACATGCT GCCGGTCTTC
TCCGACCGCC GCACCGACTG GCCCTCGCAC CCGCACGCCA CCCGCGACTC GCTGCACGAG
CACGACATGT GGGTCGCCGA GGGTCTGACC CACCGCTACC CCACCAAGGT GCTGGCCGAG
CTTTTGTCCA CCTGCCCGCA GTACTGTGGA CACTGCACCC GCATGGACCT GGTCGGCAAC
TCCACCCCCA CCATCGACAA GCTGAAACTC AAGCTCAAGC CGATGGCGCG CTACGACGCC
ATGATCGAGT ACCTGCAGTC CCACCCGGGC GTACGCGACG TGGTCGTGTC GGGCGGCGAC
GTGGCCAACG TCCCGTGGAA GAACCTGGAG AACTTCATCT CCCGGCTGCT GGAGATCGAG
TCCATTCGCG ACATCCGGCT GGCCACCAAG GCGCTGATGG GCCTGCCGCA GCACTGGCTT
CAGGACGACG TCGTCGACGG CATGGGCCGG GTGGCCACCG TCGCCCGCGA ACGCGGCGTG
AACCTGGCCA TCCACACCCA CGTCAACCAC GTCCAGTCGC TGACACCCAC GGTGGCGCGG
GCAGCGCGGG CGATGCTGGA CGCGGGAGTG CGCGACGTCC GCAACCAGGG CGTACTCATG
AACGGCGTCA ACAACTCCCC CGAGGCCCTT TTGGACCTGT GCTTCGCCCT CCAGGGCGAG
GCCAACATCC TGCCGTACTA CTTCTACATG TGCGACATGA TCCCCAACTC CGAGCACTGG
CGCACCTCGG TGTCCGAAGC GCAGGCCCTG CAGACCGCCA TCATGGGCTA CCTGCCCGGC
TACGCCACCC CGCGCATCAT CTGCGACGTC CCGTTCGTGG GCAAGCGCTG GGTCCACCAG
GTCGGCCGCT ACGACGCCGA GCACGGCATC TCGTACTGGA CCAAGAACTA CCGCACCTCC
ATCGAGGCCG CCGACCCCGA CGCGCTCACC CGCGAGTACC CGTACTACGA CCCGATCCAC
ACGCTGCCGG AAGCCGGTCA GGCCTGGTGG CGGGACCAGT TCCCGCCCAG CCAGATCGCC
GAGGCCGGTC ACGCCGCCGC CGCACTGTCC CGGGCCGCCA GCGTCTGA
 
Protein sequence
MSHQLTGQPY EYKRTPLVEP DWRRFPGWAE VTEEEWSSAQ WQRVHCVKNV AQLRGVLGDR 
VDDAFYDDLA ADGDKRATMS MLLPPQMLNT IAPTLETTAP GSWTEAYYAD PIRRYMLPVF
SDRRTDWPSH PHATRDSLHE HDMWVAEGLT HRYPTKVLAE LLSTCPQYCG HCTRMDLVGN
STPTIDKLKL KLKPMARYDA MIEYLQSHPG VRDVVVSGGD VANVPWKNLE NFISRLLEIE
SIRDIRLATK ALMGLPQHWL QDDVVDGMGR VATVARERGV NLAIHTHVNH VQSLTPTVAR
AARAMLDAGV RDVRNQGVLM NGVNNSPEAL LDLCFALQGE ANILPYYFYM CDMIPNSEHW
RTSVSEAQAL QTAIMGYLPG YATPRIICDV PFVGKRWVHQ VGRYDAEHGI SYWTKNYRTS
IEAADPDALT REYPYYDPIH TLPEAGQAWW RDQFPPSQIA EAGHAAAALS RAASV