Gene Snas_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3946 
Symbol 
ID8885146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4209673 
End bp4211493 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content70% 
IMG OID 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_003512691 
Protein GI291301413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.493509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA CGATCACCGA CGCCACCGAC ACGACGCCAT CGGACGGGAC TCCGTCGGCA 
CCGCCGCCGG ACCCCTGGTG GCGGGCGCCG GGCATCGGCG GGCCGCGACT GTCGTTCAGC
GCCGCCGCGC TGGTCGCGCT GGCGTCCGGC GGGTTGCTGC TGTTGGCGTT CCCGCCGATC
AACCTGTGGT TCATGGCGCC GCCCGCTGTC GCGCTGTTCG CGATCGCCTG TCACCGCCGC
AAGTTCCGGG GCGGGCTGGG CATCGGCTTC TTGGCGGGGC TGGCGTTCTT CCTGCCGTTG
TTGAGCTGGA CCTCCACCCA GTTGGGTCCG TTTCCCTGGA TCATGCTGTC GTTGTTGCAG
GCGCTGTACT TCGGTTTCCT GGGCGCGGCC AGCGCCCTGT CGAGCCGCTT CGCCGACCGC
TTCCGGGCCT GGTGGCCGCT GGCCGTCGGC GTGCTGTGGG TCGGGCAGGA GGCGCTGCGC
GACCGGACGC CGTTCGGCGG TTTCCCGTGG GGACGGCTGG CCTTCAGCCA GGCCGACTCG
CCGTTGGCGT CGTTCGCGTG GCTGGGCGGC GCCCCGCTGG TGACCTTCGC CGTCGCGGCC
TGCGGCGGGC TGCTGGCGCT GGCGGCCTGG CGTAGCTGGC GTGGCGGCGT CGCCCCCACG
GCTGCCGACG GCACGAACCG GCCGCTGGCG ACCGCGGCCG ACAACGACGG GGCCGGACTG
CCGAGCGCGG TGGCCGACGG CCGCGCGACC CCGGCCCGGC CGCGAGCCGC CGACACCGGG
CAGCGCCGCG TTGTCACCGC GGCGGCTCTC GTTGGCGCGG CTGTGCTGAT CGTGCTCGCG
GGGCTGGTGG TCCCGACGTG GACCACCGCG CCGTCCGGCG ACAAGACCAC CGTCGCGCTG
GTGCAGGGCA ACATCCCGCG CACCGGCGGC ATCGACGTGT TCGAGCACAA GTTCCAGGTG
CTGAAGAACC ACGTCAAGGG CACGAAGAAG CTCGCCAAGG ACATCAAGGC CAAGAAGGTC
GACAAACCCG AACTGGTGGT GTGGGCCGAG AACTCCTCCG ACATCGACCC GTTCTCCGAC
GCCGAGGCCG CCCGGCTGAT CTCCAGCGCC GCCAAGGCCG TCGACGTTCC GATCCTGTTG
GGGACACTGC AACGCGACGG CGACGGCATC CGCAACGTCT CGGTCGTGTG GGATCCCGAG
AAGGGACCGG GTTTCACCTA CACCAAACAG CACCCGGTGC CGTTCGCCGA GTACATCCCG
ATGAAACCCG CCGTTCGCGC GGTGGCCGGG CTCATCGACG AGCGGATGGT CGAGGGCATC
GACCGGGTCA ACGGCTTCAC TCCCGGCGAC AAACCCGGCG TCATCCCGGC GGCCGGTTTG
ACGGTGTCGG GCATCATCTG CTTCGAGGTC GCCTACGACG ACCTGGTGCG CACCTCGGTG
ACCGAGGGCT CGCAGATCCT CGCGGTGCAG ACCAACAACG CGTCGTTCAA CAACGCCGAG
GCCACCCAGC AGATGGCGAT GGTGCGGCTG CGTTCGATCG AACACGGCCG CCCGGGACTC
ATGGTGTCCA CAGTGGGTGT CTCAGGATTC ACCGACGCTT CCGGAGCTGT TTACGATCAG
ACCTCCTTCA ACACCTCCGC CGTTATCGTC CGAACTTTTA GTCTTGGTAC GGGCGAAACA
CCTGCGACGA GGCTCGGTGA GATACCGGAG TTCGCCGCCT GTGTGGCGGC CGTGGGTGTC
CTGGCCGCCG CCGTGGTGTT GCGTCGGCGC CGAACATCCG ACACTTCCGG ACCGGCCGTG
GTGAAGGCCG GTGACACGTA G
 
Protein sequence
MTTTITDATD TTPSDGTPSA PPPDPWWRAP GIGGPRLSFS AAALVALASG GLLLLAFPPI 
NLWFMAPPAV ALFAIACHRR KFRGGLGIGF LAGLAFFLPL LSWTSTQLGP FPWIMLSLLQ
ALYFGFLGAA SALSSRFADR FRAWWPLAVG VLWVGQEALR DRTPFGGFPW GRLAFSQADS
PLASFAWLGG APLVTFAVAA CGGLLALAAW RSWRGGVAPT AADGTNRPLA TAADNDGAGL
PSAVADGRAT PARPRAADTG QRRVVTAAAL VGAAVLIVLA GLVVPTWTTA PSGDKTTVAL
VQGNIPRTGG IDVFEHKFQV LKNHVKGTKK LAKDIKAKKV DKPELVVWAE NSSDIDPFSD
AEAARLISSA AKAVDVPILL GTLQRDGDGI RNVSVVWDPE KGPGFTYTKQ HPVPFAEYIP
MKPAVRAVAG LIDERMVEGI DRVNGFTPGD KPGVIPAAGL TVSGIICFEV AYDDLVRTSV
TEGSQILAVQ TNNASFNNAE ATQQMAMVRL RSIEHGRPGL MVSTVGVSGF TDASGAVYDQ
TSFNTSAVIV RTFSLGTGET PATRLGEIPE FAACVAAVGV LAAAVVLRRR RTSDTSGPAV
VKAGDT