Gene Snas_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3941 
Symbol 
ID8885141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4204473 
End bp4205825 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512687 
Protein GI291301409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.123998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT TTCGGCACAC GCGTCTCACG ATCACAGCGG TAGCGGTCAC GGCGATCGCG 
ATCAGCACGA GCATCGGCGT CACCGGCACC GGTGCCGACG CCGCGATCAC CGATTCCGGG
CTCGCGTCAC GGTTCTCCGC CGACCTGTAC GGCGACGTCA CGACGATCGG CAACCGGGAA
CCCGCCTGCG GCCACGACTG CGCCGAAGCC AGTTCGGCGC GGCTGCGCAT CCCCGAGGGC
GCCACGGTCG CGCACGCGCG ACTGTCGTGG GCCAGCGGCC TGGGCGAGGC GTGCCGAACC
GACGCCCCGA CGGCGTCGAC GCGGCTGCGC GTCGGCGACG CCGAGGCGGC CACGGTGCCG
GGCCGGGTCA CCGGCGGCGA CACCGCTGAG GCGGACGTGA CGAAGCGACT GTCCGGGCTG
GCGGGCGGCA CCGCCGTCAC CGTCGAGGGC GTGCGCGCCG GGGACTGCGC GGCAGGCTGG
AGCCTGACCG TGGCCTACGA GCTGCCGCGC GGCCGGGCCG ACGGCGTCGT CAAGCGACAC
GTCGCCATCT ACGGGGGCGC GCTGACCGCG TCCGAGTCCG CGCTGCGGCT GGACGGGTTC
CGGCGCTTCG GCACCGCCGC GCCGCGCCTG AGCGCCACCG GATACGGCGA CACCCGACTG
AGCGTCAACG GCACCGCGAT CGCCCCGGCG GGGTCCCACA TCACCGACAC GCCGCTGCCC
GAAGGCGTCA TCGCCGCGGG CGACACCTCG GCCGACATCG GCATCAGCGG CGCCGAACCG
CTGCTCCAGC AGGTCGCGCT GTCGGTACCG GTGCCCGACG TCAGTATCAA CGCGACCGCC
ACACCCCAGC GGATCGGCCC CGGCGACACC GTCGTCCACA CCATCACGGT CACCAACAAC
GGCGACGCCC CCGTCGAGGA CGCGTCGTTC CGCGTCGACC TGTCGCGGGC ACTGGACGAC
GCCACCCGCC CCTTCGACGT CACCGCCAGC ACCGGCGAGT CCGTGTTCAA GGGCCGATCC
CTGAAATGGA CCGGCACGCT CCCGGCCGAG GCCACCGCGA CGCTGACCTA CTCGGTGACG
GTCAAGAACC CCCGTCCCGG CGACGGCAAG CTGGAGAGCA CCGTCATCGG CGGCACCGAC
ACCAACTGCT CGGCCAAGAA GCCCGCGTCC GAGTGCTTCG TGAAGCTGAG CTTCCCGCCC
CGGCCCAAGG TGGACGTCAA CGACTCCGGC ACCGGCATCT TCCTGCCGGT GACCGGCGCG
CCTGTGGGCG GCCTGTTCGC GCTCGCGACG GTCGCGCTGC TCGGCGGCGC GGCACTGTGG
CTGGCCTCGC GACGGCCGGG CCGCGCGCGC TGA
 
Protein sequence
MKLFRHTRLT ITAVAVTAIA ISTSIGVTGT GADAAITDSG LASRFSADLY GDVTTIGNRE 
PACGHDCAEA SSARLRIPEG ATVAHARLSW ASGLGEACRT DAPTASTRLR VGDAEAATVP
GRVTGGDTAE ADVTKRLSGL AGGTAVTVEG VRAGDCAAGW SLTVAYELPR GRADGVVKRH
VAIYGGALTA SESALRLDGF RRFGTAAPRL SATGYGDTRL SVNGTAIAPA GSHITDTPLP
EGVIAAGDTS ADIGISGAEP LLQQVALSVP VPDVSINATA TPQRIGPGDT VVHTITVTNN
GDAPVEDASF RVDLSRALDD ATRPFDVTAS TGESVFKGRS LKWTGTLPAE ATATLTYSVT
VKNPRPGDGK LESTVIGGTD TNCSAKKPAS ECFVKLSFPP RPKVDVNDSG TGIFLPVTGA
PVGGLFALAT VALLGGAALW LASRRPGRAR