Gene Snas_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3908 
Symbol 
ID8885108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4176137 
End bp4176796 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_003512656 
Protein GI291301378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCAT CCTCATCCGG CCGGTCCGAC GAGTCACTGG CCTCCCTGCT GGGCGGACGT 
CGGGGTGCCG TCGACGCGAC GATCCCGCCG CTGGCCTTCG GGCTGGCGTG GTGGCTGTCG
TCCGGTTCGG TGCTCACCGG CGTCGCGGTC GCCGTGGCGG CCAGCGCCGC CCTGGCGGCC
TGGCGGTTGG GCCGGGGCAG CAAGCCGCGC TCGGTCCTGG TGGGACTGGC CGGGGTGTGC
GTGGCGGGCA TGATCGCCCT GTACACCGGG CGGGCCGAGG ACTTCTTCCT GCTGCGCATC
CTCAGCAACG GCGGCAGCCT GCTGGCCTGG GCGATCAGCA TCGTGATCCG CTGGCCGCTG
CTGGGTGTCG TGGTCGGTGT CGTACTTGGT CAAAAAATCC GCTGGCGCCG CGACCCGGCG
CTGGTGCGGG CCTACGGCCG CGCCTCCTGG ATCTGGGTGG GCCAGTACGC GGTCCGGCTC
CTGGTCTTCA TTCCACTGTG GTGGTTCGGT TTCGCGGGGG CGCTCGCCGT GGCCCAGGCC
GTGTTGACCT GGCCGCTAGT TGCCGTGTGC CTGGCGGTCA GCTGGTGGGT CCTGCGCCGC
AGCCTGCCTG ACGACCACCC GGGACTGCGC CACCCGGTCA CCGAGCCCGT CGCGCCCTGA
 
Protein sequence
MAASSSGRSD ESLASLLGGR RGAVDATIPP LAFGLAWWLS SGSVLTGVAV AVAASAALAA 
WRLGRGSKPR SVLVGLAGVC VAGMIALYTG RAEDFFLLRI LSNGGSLLAW AISIVIRWPL
LGVVVGVVLG QKIRWRRDPA LVRAYGRASW IWVGQYAVRL LVFIPLWWFG FAGALAVAQA
VLTWPLVAVC LAVSWWVLRR SLPDDHPGLR HPVTEPVAP