| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3890 |
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| Symbol | |
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| ID | 8885090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4156669 |
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| End bp | 4158804 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003512638 |
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| Protein GI | 291301360 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0297605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.188464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGG CCATTACCTA CGCCAAGGAC GACGCGGGCA TCGTCACGCT CACCATCGAC
GTGCCCGGCG AAGCCGCCAA CCCCATGACC ACCGAGGCCA TCGCCGCTCT CAACGCGGCG
GTGACCCGGC TGGAGTCCGA ACGCGACTCG GTCACCGGCG TCATCGTCAC CTCCGCCAAA
CCGGTGTTCT CGGCCGGGGG CGACCTGCGA CGGCTCGTGC AGGCCGACCA GAGCCAGGTC
GAGACCGTAC TGTCCGAGAT GGACGACTAC AAGCGGCCGC TGCGGCGGCT GGAGAAGCTC
GGCAAACCTG TCGTGGCCGC GATCAACGGC AGCGCCATGG GCGGCGGTTT CGAACTCGCG
CTGGCCTGCC ACCGTCGCAT CGTCGCCGAC GATCCGAAGC TGCGCGTCGG CCTGCCCGAG
GTCACCTTCG GCCTGCTGCC GGGTGCCGGT GGTGTGGTCC GCACGGTGCG GATGCTGGGC
CTGATGGCCG CGCTGCCGCT TTTGACCGAG GGCAAGCGGC TGGGTCCCGC CGACGCGCTC
GCGGCCGGAC TGGTCCACGA GGTGGTCCCC GCCGCGTCGT TGCTGGACAA GGCCCGCGAA
TGGATCGCCT CGGGCCCCGA GGCCGTGCAG CCTTGGGACG TCAAGGGCTA CAAGCTGCCC
GGCGGCGGCC CCAACGACCC CGGCGCGGGT CAGCTGCTGG CCGCGGCTCC CGCGATGCTC
GTCAACAAGA CCCACGGCGC CTACCCGGCG CCGGAGAAGA TCCTGGCCGT CGCCGTCGAA
GGCGCACTGG TCGATGTGGA CACCGCCTTC GCGATCGAGA CCCGCTACTT CACCGAACTG
GCCTGCGGCC AGGTGTCGAC GAACATGATC GGCGCGCTGT GGTTCGACCT CAACGACATC
AACGCGGGCC GCTCCCGCCC CGACGCGCCC AAGCGCAAGG TCGCCAAGGT CGGCGTGCTC
GGCGCGGGCA TGATGGGCGC CGGAATCGCC TACGTCTCCG CCTACGCGGG CATCGACGTC
GTCCTCAAGG ACGTGTCGGC CGAGGCAGCC GACAAGGGCA AGGCGTTCTC GGCCGCCACA
CTGGACAAAC GGGTCGGCGC GGGCAGGATG ACGCCCGAAC GCCGCGACGA GATCCTGTCG
CGCATCACCG CCACCGGCGA CGACGCCGAC CTGGCCGGTT GCGACCTCAT CATCGAGGCC
GTCTTCGAGA AGCGCGCGCT CAAGGAGCAG GTGCTGGCAG CGGCCGAGAC CCAGGCGACG
GGCGACGCGG TCATCGCGTC CAACACCTCG ACGCTGCCGA TCACGGGACT GGCCAAGGCG
GTGCCGCAGG CGGAGCGCTT CGTCGGCCTG CACTTCTTCT CGCCGGTGCA CAAGATGCCA
CTGGTGGAGA TCATCCGCGG CGAGGCCACC AGCGACGAGA CCCTGGCCCG CGCCTTCGAC
TACGTCCGGC AGATCAACAA GACGCCCATC GTCGTCAACG ACAGCCGTGG CTTCTACACC
TCGCGTTCCT TCGCCACCTA CGCCCTGGAG GGCCTGGCGA TGGTCGCCGA GGGTGTTCCG
GCGGCGCTGG TCGAGAACGT GGCCCGGCAG GCGGGCATGG CCGTCGGCCC GTTGGCGGTG
TCCGACGAGG TGTCGCTGTC GCTGATGTGG GGCATCAACC AGCAGACCAT CGCCGACTAC
GCGGCGGCGG GGGTCGAAGC CCCCGTCCAC CCGGCGATGT CCCTTGTCGA CACGTTCGTC
AACGAACTCA ACCGTCCCGG CAAGGCCGCC GGTGCCGGGC TGTACGAATA CCCGGCCGAG
GGCAAGAAAC GGCTGTGGCC CGAACTGGCC ACCCGCTACG GCCGCGACAG CGGCGTCTCG
GCGGCCGACG TGCGTGACCG GCTGCTGTTC GTCCAGTCGC TGGAAGCGGT GCGGTGCCTG
GAGGAGAACG TCGTCACCTC GGCGGCCGAC GCCAACATCG GTTCCATCTT CGGCTGGGGT
TTCGGCGCCT GGTCCGGTGG CGTGCTGCGG TTCATCAACC AGTACGGCCT GGACGAGTTC
ATCGCCCGCG CCGAGTACCT GGCCGAACGC TACGGCGAGC GGTTCGCCGT CCCGCAGCTG
CTGCGCGACC ACGCGGCCAA GGGCGAGGAC TTCTAG
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| Protein sequence | MTEAITYAKD DAGIVTLTID VPGEAANPMT TEAIAALNAA VTRLESERDS VTGVIVTSAK
PVFSAGGDLR RLVQADQSQV ETVLSEMDDY KRPLRRLEKL GKPVVAAING SAMGGGFELA
LACHRRIVAD DPKLRVGLPE VTFGLLPGAG GVVRTVRMLG LMAALPLLTE GKRLGPADAL
AAGLVHEVVP AASLLDKARE WIASGPEAVQ PWDVKGYKLP GGGPNDPGAG QLLAAAPAML
VNKTHGAYPA PEKILAVAVE GALVDVDTAF AIETRYFTEL ACGQVSTNMI GALWFDLNDI
NAGRSRPDAP KRKVAKVGVL GAGMMGAGIA YVSAYAGIDV VLKDVSAEAA DKGKAFSAAT
LDKRVGAGRM TPERRDEILS RITATGDDAD LAGCDLIIEA VFEKRALKEQ VLAAAETQAT
GDAVIASNTS TLPITGLAKA VPQAERFVGL HFFSPVHKMP LVEIIRGEAT SDETLARAFD
YVRQINKTPI VVNDSRGFYT SRSFATYALE GLAMVAEGVP AALVENVARQ AGMAVGPLAV
SDEVSLSLMW GINQQTIADY AAAGVEAPVH PAMSLVDTFV NELNRPGKAA GAGLYEYPAE
GKKRLWPELA TRYGRDSGVS AADVRDRLLF VQSLEAVRCL EENVVTSAAD ANIGSIFGWG
FGAWSGGVLR FINQYGLDEF IARAEYLAER YGERFAVPQL LRDHAAKGED F
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