Gene Snas_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3854 
Symbol 
ID8885054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4113574 
End bp4114848 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID 
Productmonooxygenase FAD-binding protein 
Protein accessionYP_003512603 
Protein GI291301325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTT CGGTATCGAT CATCGGCGGC GGCATCGGCG GCCTGACCCT CGCGCACGGG 
CTGCGGCGCC GCGGCGTTAA CGTCCGGGTC TTCGAACGCG ACCAGTCCAA GACCGAAAGG
CTACAGGGCT ATCGGGTTCA CCTGTCCCCC AAGGGATGCC AGGCACTGCA CGAATGCCTG
CCGCCGGAGC TGTACCAACG GTTCCTGGCC ACCACCGGAA AATCCAACTC CAGTCTCGGC
TTCTACGACA AGGACCTGCG CGAACTGCTG GTCGTCGAGT CGGAGGAACT CAAGACCGAG
CACGACACCG CCAACTACCG GTCGGTGAAC CGGATGGCGC TGCGCGAGGT CCTGATCTCC
GACCTGCGTG AGTCGCTGGA ACTGGGCAAG AAGTTCGTCC GCTACGAGAA GTTGACCGAC
GGCCGGGTGC GGGCGCACTT CGACGACGGC AGCCACGCCG ACGCCGACCT GCTGGTGGCC
GCCGACGGCG CCGGTTCGCA AGTGCGGCAA CAGTACCTGC CGCAGGCGCC CCGAGTGGAC
ACCGGCGCGT TCGTCATCTC CGGGAAGGTG CCGCTGACCG ACGCGACGAT GGGCCTGCTG
CCCCCGCAGG CGGACACCGG GCCGTGCATG ATCTTCGGGC CGAACGGGCG CATGGGTTTC
GTCGCCGCGC ACCGGGTCCG CGACAGTGGA CACTCCGAGG GTGAGCGGGA TCTGCTGTGG
GACGACGCGG CCGACTACAT CATGTGGAAC ATCGTCACCA CCTGGGACGG CCAGGATCAC
CGCGACACCC TGATGGCGCA CTCCCCCGAG CGGCTGCTGG AAACGGCACT GTCCTCGGTG
GCGGGATGGT CGCCGCAGCT GGCGGAACTG TTGCGCGCCA GCGACCTGGG CACCGTCATG
ATCTACCCGT TCAGCCGGGC CACGACGCTG GAGCACTGGC CCGCCAGCAA CGTCACGCTG
CTGGGCGACG CGATCCACTG CATGCCGCCG ACCGCCGGGC AGGGCGCCAA CACCGCGATC
CGCGACGCCG CGCTGCTGCG CGACACCATC GTGTCCGTGG TGGACGGTGA ACGCGACCTG
GTCGCCGCGG TGGCCGACTA CGAACAACGG ATGCGCGGCT ACGCGTATCC GATCGTCGAG
GAGGCCATGC GCAACCTGCG CGGCGGTATC TCCAAGAGCC GCGTCGGCCA CGCCGCGACC
AAGTCGGTGT TCAGGATGAT CAATAGGATC GGTCCGGTCA AACGCCGCAT GGCGCGGGCG
ATGACCTCCG ACTGA
 
Protein sequence
MTLSVSIIGG GIGGLTLAHG LRRRGVNVRV FERDQSKTER LQGYRVHLSP KGCQALHECL 
PPELYQRFLA TTGKSNSSLG FYDKDLRELL VVESEELKTE HDTANYRSVN RMALREVLIS
DLRESLELGK KFVRYEKLTD GRVRAHFDDG SHADADLLVA ADGAGSQVRQ QYLPQAPRVD
TGAFVISGKV PLTDATMGLL PPQADTGPCM IFGPNGRMGF VAAHRVRDSG HSEGERDLLW
DDAADYIMWN IVTTWDGQDH RDTLMAHSPE RLLETALSSV AGWSPQLAEL LRASDLGTVM
IYPFSRATTL EHWPASNVTL LGDAIHCMPP TAGQGANTAI RDAALLRDTI VSVVDGERDL
VAAVADYEQR MRGYAYPIVE EAMRNLRGGI SKSRVGHAAT KSVFRMINRI GPVKRRMARA
MTSD