Gene Snas_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3810 
Symbol 
ID8885010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4067211 
End bp4067759 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID 
ProductDoxX family protein 
Protein accessionYP_003512559 
Protein GI291301281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00235766 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACA TCGCCTCTCC CACCGCATCC ACCCACGAAA GCAACGACAA GCCCGAATCC 
CCACTGTCCC CGTTCGCCCG CGTGGCCCTG GCACTCGCTC GGATCTGCCT GGGATGGATC
TTCCTGTGGG CCTTCCTGGA CAAACTCCTG GGACTCGGCC GCGGCACCCC CTCCGACGGC
TCCTGGCTCG ACGGGAACAG CCCCACCGCC GGTTACCTCG GCAGCGTCGA GGGAACCTTC
GCCGGGCTGT TCTCCGCCAT GAGCGGGCAG GTCTGGGCCG ACTGGCTGTT CATGCTCGGC
ATGGGCGGCC TGGGTGTCTC GCTCATCCTC GGCATCGGCA TGCGGGTGGC CGCCATCGGC
GGCATCGCCC TCCTGGGCAT GCTGTGGCTG TCCTCGCTGC CGCTGGAGAA CAACCCCTTC
ATGGACGAAC ACCTCGTCTA CCTCGTCACC GCCATCGCGC TGGCGGCCGC GCGCGCCGGG
GACACCCTCG GCCTCGGCAA GGCGTGGGCG CGCACGCCGC TCGTGCGCGC GCTGCCGTTC
CTGCGATAA
 
Protein sequence
MTDIASPTAS THESNDKPES PLSPFARVAL ALARICLGWI FLWAFLDKLL GLGRGTPSDG 
SWLDGNSPTA GYLGSVEGTF AGLFSAMSGQ VWADWLFMLG MGGLGVSLIL GIGMRVAAIG
GIALLGMLWL SSLPLENNPF MDEHLVYLVT AIALAAARAG DTLGLGKAWA RTPLVRALPF
LR