Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3734 |
Symbol | |
ID | 8884933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3979641 |
End bp | 3981332 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | IucA/IucC family protein |
Protein accession | YP_003512484 |
Protein GI | 291301206 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0245205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.144633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAC CCCACGACGC CGCGGCCCAC ATCACCGCCA GTCTCCTGGC CGCCGCCTGG CGCGAGAACC TCGACGGCCT GCGCGACAAC GCCACCGTCA CCCCCGGACC CGCGCCCGGA CAGCTGACCG TCCACATCGA CACGTCCGCC GGGCACATCC GTGCCACCGC CCAGGCCGGG CCCTTCGACC AGATCACCCC CACCGGCCCC ATCGACTGCG ACGGCAACAC CGTCACCGAC CCGGTCACGC TGCTGAAAGC CCTGTCCCCC AACGCCCCCG AACACCTCAC CCGCGAACTC GACGACGCCG TCACCGGCCT GGCCACCGCC CTGCCCCGCC ACCAGCGGCT CACCGACACG ATCGCCGAGA CCGCCAAACA CCACGGCGCC ACCACCACCG TCGCGCTGGC CGACATCCTC ACCGACCGGC AGGCCGACTT CCTGCCGTGC CGGTTCCTCG AACCGCTCGC CGTCGACGGA CACCACCTGC ACCCCTGCGC CCGCACCCGG CTGGGCTGGA ACGACGCCGA CCGCCGCGCC TACGACCTCG AGACCCCCGA ACCGATCGCG GTGCGATTCG TGGCCGCCCG CCGCGACGCC ATCGCCTCGG CCACCGACGA CCATGGCCGC GACCTCGGCG AACTCCTCGA ACACCTACAC CCGCCGCTGC GCGACCTGCG CGACGACGAC ACCATCGCCA TCCCCGTCCA CCCCTGGCAG CACCGGCACC TGCGCGAGGG CCCCGGCCGC GACCTGTACG CCGACGGCAC CCTGCGCGAC CTGCCCACCC GCATGGACAC CGAGCCCACC GCCTCCATCC GCACCCTCGT CACCGCGGAC GGCAGCTACC TCAAGTGCTC ACTGTCCATC CACATCACCT CCACCACCCG CGGCATCTCC CCCGCCACCG TCCATAACGG CCCGATCCTG TCCCGGCTGC TGTCCGAGGT CATCGGCGGC GACGACTACC TGGCGCCGCG CATCGACATC CTCACCGAAC ACGCCGGAGC CAGCCTCCCG CACGGCCACC CCGCCGCCCG GGAACTGTCC TGCCTGCTGC GCGCCCGGCT GTCCGACGTC ACCGGCCCGG GCGAACTCGC CGTACCCGCC ACCGCCCTGG CCGCCACCTC ACCGGTCACC GGACGCAGCA TCGCCGCCGA ACTGGTCGAC GACAGCGGCC TGGACGCCGC CGACTTCCTG CACCGCTACA CCTTCGGCCT CGCCGGGCCC ACCATCCGCC TGGCCACCCA CTACGGCATC GGCACCGAAG CCCACCTGCA GAACTGCGTA CCCACCTTCC GCGACGGCAT CCCCGAACGC GTCATCGTCC GCGACCTCGG CGGCGGCCGC GTCCTGCTGC CCCGGCTGGC CGAGTCCGGA CACCGCCCCG ACCTCCACCC CGCCTCCGTC ATCACCACCA CCGACGCCGA GACCGTGCGC GCCAAGGTCG CCTACACCGT GTTCCAGAAC CACCTCGCCG CCGTCACCAC CGCCCTGACC CAGGACTGTG GACTCACCCA GGACCGGGCC TGGCGCGTCA TCGCCGACAC CGTCGACACC CTCGACCTGG CGTCCGGCGA CCGCGACTTC TACACCGCCG CCACCGTCCC CCACAAGGCG CTGCTCACCA TGCGCGTCAA CCCCGGACGC GACATCCACG TCCCCGTCAC CAACCCGCTG GCCCGCCCAT GA
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Protein sequence | MTTPHDAAAH ITASLLAAAW RENLDGLRDN ATVTPGPAPG QLTVHIDTSA GHIRATAQAG PFDQITPTGP IDCDGNTVTD PVTLLKALSP NAPEHLTREL DDAVTGLATA LPRHQRLTDT IAETAKHHGA TTTVALADIL TDRQADFLPC RFLEPLAVDG HHLHPCARTR LGWNDADRRA YDLETPEPIA VRFVAARRDA IASATDDHGR DLGELLEHLH PPLRDLRDDD TIAIPVHPWQ HRHLREGPGR DLYADGTLRD LPTRMDTEPT ASIRTLVTAD GSYLKCSLSI HITSTTRGIS PATVHNGPIL SRLLSEVIGG DDYLAPRIDI LTEHAGASLP HGHPAARELS CLLRARLSDV TGPGELAVPA TALAATSPVT GRSIAAELVD DSGLDAADFL HRYTFGLAGP TIRLATHYGI GTEAHLQNCV PTFRDGIPER VIVRDLGGGR VLLPRLAESG HRPDLHPASV ITTTDAETVR AKVAYTVFQN HLAAVTTALT QDCGLTQDRA WRVIADTVDT LDLASGDRDF YTAATVPHKA LLTMRVNPGR DIHVPVTNPL ARP
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