Gene Snas_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3646 
Symbol 
ID8884845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3879076 
End bp3879786 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512397 
Protein GI291301119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGA TCGACATCGA GCACGACGGC GCCACGCACC GCCTGGAGCC CGGCGGCAGC 
CTGACCGTCG GCCGTGACGA GAGCTGCGAC ATCTGCCTCG ACCCCCAGGA CATGGGCATC
AGTCGCCTGG CGGGCCGCAT CGCCGACGTG GGCGGGATCT GGGCGGTGAC CAACCTCAGC
CGTAAACGCC CACTCCACAT AGTCGACGCC ACCGGCTTCG CGGTACCCCT ACCGGTGGCC
CTGTCCAACG GCCCGCCCTC CCGCCGCGTG GTGGACACGG TGCCCATGAC GGTCCTGATC
GCCGGAGAGG AGTGGACACA CGCCCTGGTG CTGCGGCTGT GCCATTCCCC CGGCGAACCC
GCGGCCCCCA GCCCACGCGA CGGCCTCGAA ACCCGAACCC AACTGCCCAA CATGACCGAC
CGACGCCGCG AAGTACTGGT CGCCATGGCC GAGGGCTACC TACGCCCCTA CCCCTTCTAC
GACCCGAGGC CGCGCACCTA CCAGGACATC GCCGATCGCC TGGGGCTGAG CAAATCCCAA
GTCGTCAAAC GCATCGAACA GGTACGACTC GACCTGGTCG CGGCAGGAGT CCTGGGCTTG
GAGAAGGAAG TCGACGCCCG CCGAGCCCTG TGCGAGTGGC TGCTGGCCAC CCGTGCCCTC
AGCCGCTCCG ACGTCGACTG GCTACGCCAC CGCCGCGACC GGAACACGTA A
 
Protein sequence
MSGIDIEHDG ATHRLEPGGS LTVGRDESCD ICLDPQDMGI SRLAGRIADV GGIWAVTNLS 
RKRPLHIVDA TGFAVPLPVA LSNGPPSRRV VDTVPMTVLI AGEEWTHALV LRLCHSPGEP
AAPSPRDGLE TRTQLPNMTD RRREVLVAMA EGYLRPYPFY DPRPRTYQDI ADRLGLSKSQ
VVKRIEQVRL DLVAAGVLGL EKEVDARRAL CEWLLATRAL SRSDVDWLRH RRDRNT