| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3603 |
|---|
| Symbol | |
|---|
| ID | 8884802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3830088 |
|---|
| End bp | 3831317 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Lanthionine synthetase C family protein |
|---|
| Protein accession | YP_003512356 |
|---|
| Protein GI | 291301078 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.853914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC TCGACGATCA GATCACCACC GTCGCGCAAC GCCTCCGCGA CCCCGAAACC
GTCGTCGCCG CTGTCGCCGG TGCCGAGGTG GCGTCCCTCA CCCATGGCCT GGCCGGGACT
GCGCTACTGC ACGCCCGCCT GGCTCACATC GACCCCGACT TCGCCCACGC GGCTCACCGC
CACTGGACCG CCGCCGCCGA ACTCCTCAAG AACCACCCGG GCGGCTTCAG CGGTATCCAA
GGCGGACTCG GCGGCCTGGC CGCATCCCTC ATCATCGGCA CCAGCTACCT GCCCGACACC
CACCACCATC CCGCCACCGC TCCTGGCGCA ACATGGCTGT CCACATGCGC CAGCGACATG
GCCGACCTGT ATCAGCGCAC CGACATCCTC ACCTGGGACG TCTACGACGC GATCACCGGC
CTGGCCGGGA TCGGCCGCGT CCTGCTGGCC GCCCACCACA CCGCAGTCGG CAATGTCGAG
CCCGGTCTGA AAGCAGCGCT GACCACCTTG ACCGCGATCC TCGCACCCCG CGACACCCAC
CGACCCGGAT GGTGGATGCC CGCCGCAGAC CACCCCGAGG CCGTCGCCGT CCACCCCTCA
GGGGCAGCAA CCACTGGCTT GGCCCACGGC GTGGCAGGGC CACTGGCATT CCTGTCCACC
GCCCACATCG CCGGATGGTC CGTACCCGGC CAAACCGACG CCATCGACCA CGCCGCCACC
TGGCTGGTGC GCTGGCGACG TGACGATGGG ACATGGCCTC CCGCCGTCAC CGGCGACGAA
CTCGACAACC ACACCCCACC CGCCACAACC GGCCGCGCCG ACGCCTGGTG CTACGGCACT
CCCGGCATCA CCCGCGCGCT CATCCTCGCC GGGCACGCCC TGGGCGAACC CGAAGTACTC
CTCATCGCGG GCAACGCCCT CCACGATTTT GCCGACCGAT CACCCGAACA GTGGGATGTG
GACGGACCGA CCCTGTGCCA CGGCTATGCC GGAATCGTGC AGTCCCAGCC CGCCAAGGAT
CCCGTCACCA AGGCCGCCGT CAACGAAGTC GCCGCGGCCT TCGATCCCGA AAGCCCTTTC
GGGTTCCAGC ACCACGACCA CGGCCAGACC CACGACCAAC CCGGCCTCCT CGTCGGTGCG
GCCGGTGTCG CCCTCGCCCT GGCCGACTAC CGACAGCTTC CCGCCCCCAG CACCCCAGCC
CCCTGGGATT GCCTGCTCCA CCTGTCATAA
|
|---|
| Protein sequence | MTTLDDQITT VAQRLRDPET VVAAVAGAEV ASLTHGLAGT ALLHARLAHI DPDFAHAAHR
HWTAAAELLK NHPGGFSGIQ GGLGGLAASL IIGTSYLPDT HHHPATAPGA TWLSTCASDM
ADLYQRTDIL TWDVYDAITG LAGIGRVLLA AHHTAVGNVE PGLKAALTTL TAILAPRDTH
RPGWWMPAAD HPEAVAVHPS GAATTGLAHG VAGPLAFLST AHIAGWSVPG QTDAIDHAAT
WLVRWRRDDG TWPPAVTGDE LDNHTPPATT GRADAWCYGT PGITRALILA GHALGEPEVL
LIAGNALHDF ADRSPEQWDV DGPTLCHGYA GIVQSQPAKD PVTKAAVNEV AAAFDPESPF
GFQHHDHGQT HDQPGLLVGA AGVALALADY RQLPAPSTPA PWDCLLHLS
|
|---|
| |