| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3598 |
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| Symbol | |
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| ID | 8884797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3821729 |
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| End bp | 3824053 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003512351 |
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| Protein GI | 291301073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.867901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.892445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT TTGATGACGT ACGCGCGATT GCCCGTGCTT TTGTGGAGTA TGCAGATAGT
ACGTGGGCCT GCGACCCTGA ACCCTATCTT TGTCGCCATG CCGCAGAATT CACCGCTGAG
GCTAGTATCT TGGCGGAACT GCTGCCGCAA CAAGACTTTC TAAAGAATGC TGATCCACAT
CGCTTGGTTC CTCTGCTGCG ACAAGAACTC GGAGGCCCTG CTGCCCGCCT AGCGATCTCG
TATCTGCTCC ATGCAGGTTA TCACCGTAAT ACGCCCAATC CTGATCAACG CGCGCTTCGG
ATTTACATAG ACCAAATTCG TGCTGGTATC GCACATCCCA CCGTCGACCT TCGCGCTGAA
GATTGGACAC CGCGATGGGC CATAGGAGCC CACTTTAGCC CCGCGCTCTT CGAAACCCTC
ACCGGGTATT TCCGAAAAGT CACAGCATTG GCATGCACCA CGGTAAACGG CGACTCCGTA
GCCATCATCG GAAGTATTGA TGGGACAGTT CGAGCATGCA GTCTTACCAC CGGACAACAA
TACCGTCCCG ATCCGACTGA TTGTCCCGAA GTGGTAACAG CATTGGCATG CACCACGATT
AACGGTGACC CCGTAGCCAT CATCGGTGGC ACAGCTGGGA CTCTTAGGAT CTGGAATCTA
ATTACTGGGA TAGAACACCG TCGATCGTTG TTTGGCATTC GGGCGGTTCG AGCGCTGACG
TGCACCACGA TAAATGGCGA CCCGACGGCC ATCCTAGTTA GCGATGACGA AACTGTGTGG
CGATGCAGCC TTACCAACAG ATTTCGTAAC GATCTGGTAC GGCTTACTAT TTCAAAGCCC
ATAACGGCGT TGACCTGTGC CACAGTAGAA GAACAACCTG TAGTTATTAC AGGCAGCAAG
AGCGGCAATG TACGATTGCA CAATCTCAAT GCCAACAACG AGTGGCGTGT AACCTTGCCG
AAACGCAATT GCGAAGTGCG GGCACTTGAT TTCACCACCG TCAACGGTGA CCCTTTAATA
GTCATTGGTG ACTATGACGG GTCGCTTAGA ATATTGAATC TTGCGACGCG TGAGCAAACC
TGGCTCAACG TTTCAGAGGC AACCGAAGAT CCCAACTCAT ATCCGAGGGC ACGCCGAAAG
GAAGTCGTGT CGGCGACATC TTCGGAAGAA GATGGGAGTT CCATCGCAGT CACCATAGAT
TTCAAGGGAA CGTTGCGTAT ATGGGACCTC GTTGCGGGCA CACATTATTG TCCCGATCTT
GACCGAAATA CCGCCCTGTG GTCGCCCGCG CTCTGCGCTA CAGTAGACGG TCGCTCGGTG
ATTATAGTTG GAAGCCGCGA CGGAAAGGTC CGCGTGTGGG ACTCCGCCAT TGAACAACAG
ACCGAGTCGA AACCCATATC CGTCGAAAAA GTCACAGCAA TCGCATGCAC AGTCGCAAAT
AGCAATCCAG TAGCGGTAAC CCTGAATAAT CGCGCGACAG TGCAAGTATT GGACCTTGCC
ACCGCAGAAC GGCTCCGTCT GGACATTCGT GGACATAGCG GTCACCTGAC GGCAGTAGCA
TGCACGACGG TTGACGGTCA ACCTATAGCC GTCATTGGTG CTAATGACGG AACCGTACAG
GCTTGGAATC TTACGACAAG ACAATCACAT TGTGAACCGC TCACTGAAAG CAACGACCTA
ATCCTCGCGG TGGCATGCAC AACAATTGGC GGTCAACCTG TAGCCGTCAT TGGCGGTAAT
GATGGAACCG TATGCGTTTG GAATCTTGGA ACTGGACAAC AACGCCGCAT GGTCGTGTCC
GAAGAAGCTG GGCAGATCAC CGCAGTGGCG TGCACGGATA TCAACGGTGA GTTGGTAGTT
GTCATAGGCT GCGCAAACGG ATCATTGTGG GTAGGGAACC TCGCTACCGG GCAACAGTAC
CGCCCAGATT TCGCTAAAGG TGTCCTGCCG ATTCGCACTT TGGCGTGCAC AACCGTAAAT
AGCCACGCGG TGGTGGTCCT CAGCGGTAAT GAAGACTCCG TGCAATGCTG GGATCTCACC
ACCCGACGAC ACCTCGGCCC AAACCAGAGC AGTCGCGTAT TGCCGGTTCG TACGTTGGCG
TGCGCGACAG TGGATAATCA CCCTATAGCC GCCATTTGCA GCAACGACGG GACAGTGCGA
GTCTGGGATT TGCAGAGGCA CAAGCAATTG ACACAACCTA TCCGCATTCT CGATCCAGTA
GATTGCTTGG CCATAGCCCC CGACCTATCG CTAGTTATTG CATATAACAC CGAGGTAATG
GCCTTCAATC CACCCCAAAG GTGGGACTGG AAGGAAGATA CATGA
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| Protein sequence | MTKFDDVRAI ARAFVEYADS TWACDPEPYL CRHAAEFTAE ASILAELLPQ QDFLKNADPH
RLVPLLRQEL GGPAARLAIS YLLHAGYHRN TPNPDQRALR IYIDQIRAGI AHPTVDLRAE
DWTPRWAIGA HFSPALFETL TGYFRKVTAL ACTTVNGDSV AIIGSIDGTV RACSLTTGQQ
YRPDPTDCPE VVTALACTTI NGDPVAIIGG TAGTLRIWNL ITGIEHRRSL FGIRAVRALT
CTTINGDPTA ILVSDDETVW RCSLTNRFRN DLVRLTISKP ITALTCATVE EQPVVITGSK
SGNVRLHNLN ANNEWRVTLP KRNCEVRALD FTTVNGDPLI VIGDYDGSLR ILNLATREQT
WLNVSEATED PNSYPRARRK EVVSATSSEE DGSSIAVTID FKGTLRIWDL VAGTHYCPDL
DRNTALWSPA LCATVDGRSV IIVGSRDGKV RVWDSAIEQQ TESKPISVEK VTAIACTVAN
SNPVAVTLNN RATVQVLDLA TAERLRLDIR GHSGHLTAVA CTTVDGQPIA VIGANDGTVQ
AWNLTTRQSH CEPLTESNDL ILAVACTTIG GQPVAVIGGN DGTVCVWNLG TGQQRRMVVS
EEAGQITAVA CTDINGELVV VIGCANGSLW VGNLATGQQY RPDFAKGVLP IRTLACTTVN
SHAVVVLSGN EDSVQCWDLT TRRHLGPNQS SRVLPVRTLA CATVDNHPIA AICSNDGTVR
VWDLQRHKQL TQPIRILDPV DCLAIAPDLS LVIAYNTEVM AFNPPQRWDW KEDT
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