Gene Snas_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3530 
Symbol 
ID8884729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3740353 
End bp3741105 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512285 
Protein GI291301007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.379119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA ATCCCGATCC ATCGAGGATC ACCGCGGCCA CGTGGCGGCT GTGGGAGGAA 
TCCGCCGCGG CGATAGGCGA CGTTCAGTTG GGCGGGATCT TCGCCGCGAA ACCGGGTTAC
CACAACACCC GCGCGGCGAA CGCCGGTGGC GACTACTCGA TCACCAAGAC CGCCGACAAG
CGCGGTCCGT CCAATAAGGC CGCCGCCTTG GACATCACCT ACCCCGAGGC GCACTCGGGA
GACTTCCGGC GGATCAAACG CGACACCAAA CGGCTGATGG ACGCCGCCAA AGCCAAGGAC
CGCAGGGCAT ATCGCGACGG TGTCCCGGTC TTTCGGGAGG TCATAGGAAA CGTCGGCGGC
GCCGCCAAGG CGTACGACCT GTACAGCAGG TCCGAGTCAC ACCGCGACGA CAGCCACCTG
TGGCACATCC ACATCAGCTT GACCAGAAAA TTCGTCGACG ACTGGGACGT CCTCAAAGGG
ATCGTCTCGA TACTCGGAGG GAAGGTAAGG GACTTGATCG GTCTGCGCAA AGGCGATTCG
GGGCAGGAAG TCAAGGCATT GCAGTCGTGT CTGGAACACG CCGGATTCAA AACCAAAGTA
GACGGTGAAT ACGGGGACAA GACCGCTGCC CAGCTTCTGG CCTGCCGGAA GTCGATGGGG
TCGGATGCCG ATTCCGGGGC TGTTGTCACC GGTTACGCGT ACCAGCAACT GCACCGCGCC
ATGATCAAGG CGAGCATGGA GGAACACGGC TGA
 
Protein sequence
MARNPDPSRI TAATWRLWEE SAAAIGDVQL GGIFAAKPGY HNTRAANAGG DYSITKTADK 
RGPSNKAAAL DITYPEAHSG DFRRIKRDTK RLMDAAKAKD RRAYRDGVPV FREVIGNVGG
AAKAYDLYSR SESHRDDSHL WHIHISLTRK FVDDWDVLKG IVSILGGKVR DLIGLRKGDS
GQEVKALQSC LEHAGFKTKV DGEYGDKTAA QLLACRKSMG SDADSGAVVT GYAYQQLHRA
MIKASMEEHG