Gene Snas_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3521 
Symbol 
ID8884720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3732170 
End bp3732715 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_003512277 
Protein GI291300999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.410023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TTCCATGGCT CGTCGAGGTA CTGCGGGCCG ACGGCGTCGA GGTCGTCGAG 
GAAGGTGACT GGCAGAACCA CATGCGGCCC GGGGAGTTCG CTCCCATCGG GGTGCTGTGG
CACCACACCG CCGGTCCGCC CAGCAGCGCC GAGAACCCGG CACCGTCGCT GGGCACGGTG
ATCAACGGCC GCCCCGACCT GCCCGGCCCG CTGGCGCAGG CGCTGGTCGA CTTCAACGGC
GTCTTCCACG TCATCTCCGC CGGACGCTCC AACCACGCGG GCAAATCCGG TGGCAGCGGC
CCGATCCCGG CCGGTGACGG CAACGCCCTG ATGGTGGGCT GGGAGATCGA CTACGACGGT
GTGAACCAGC AGATGTCGCC CGCGCAGTAC CAGGCTTCCC TGAAGGCCAC CGCGGCCGTC
CTGCGTCGAC TCGGCACCGA CGCAGAACAC GCCCGCGGCC ACAAGGAGAC CAGTACGACC
GGCAAGATCG ACCCGTCCTT CGTCGATCTC GCGGCGATGC GCGCCGAAGT CGCCAAGTTG
ATCTAG
 
Protein sequence
MATIPWLVEV LRADGVEVVE EGDWQNHMRP GEFAPIGVLW HHTAGPPSSA ENPAPSLGTV 
INGRPDLPGP LAQALVDFNG VFHVISAGRS NHAGKSGGSG PIPAGDGNAL MVGWEIDYDG
VNQQMSPAQY QASLKATAAV LRRLGTDAEH ARGHKETSTT GKIDPSFVDL AAMRAEVAKL
I