Gene Snas_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3490 
Symbol 
ID8884689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3697434 
End bp3697760 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003512246 
Protein GI291300968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.250706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGA AAGTGCGCAT CACCCCGATC GTCGCCTCGT TGCTGGCGGT GATGCTGACC 
GAACCAAGCG CGGAGCACTA CGGCCTGGAT CTCGTGCGCC GCACCGGCTT GTCGGCCGGA
ACCATCTACC CGGTCCTGAT GCGACTCCGC AAGGCCGAAT GGGTGGAGGC CACGTGGGAA
CAGATCGACC CCCACGAAGC CGGACGGCCC GCGCGGCGCT ACTACCGCCT CACCGCGCAC
GGCGCCACCG CGGCGCGCAC CGAACTGGAG GCCATGTTCC GAAAACTGTC CATTGTGCCG
GGCATCACCG GGGAGGCCAC CGCATGA
 
Protein sequence
MPEKVRITPI VASLLAVMLT EPSAEHYGLD LVRRTGLSAG TIYPVLMRLR KAEWVEATWE 
QIDPHEAGRP ARRYYRLTAH GATAARTELE AMFRKLSIVP GITGEATA