| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3486 |
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| Symbol | |
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| ID | 8884685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3688878 |
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| End bp | 3692159 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | Lanthionine synthetase C family protein |
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| Protein accession | YP_003512242 |
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| Protein GI | 291300964 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0546748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGG AGGCGGGCGT TGCTGACGTG CCCGCCTCCG GCTTTGCCTC CCTCGCAACG
GAAAGGACGA CTGTGAACTT CGTCTCGGAT CCCCGGACCG CGGCGCTTCA CCTGGCCGAA
CCGCTCGCCG ACCGGCTCGC CTCGACGCCG CTCACCGACG GGTCCGAGGC CACAGCGCGA
CTGGAACGCT GGCGCGACAG GGAACCCTTC GACAACGAAC GGCACTGGCG GGATCGGTTG
GCCGCCGACG GTCTCGACGA GGATCTGCTG GCGCGGCTGC TCGGCGAGAC GTCGGCCGAC
CTGGAGCGAC GGCTGCCGAG GCCGTGGTGG ACGGGCTGGC TTACTGAAGC CGCAACGGAA
CCGCAGGTCG CGCCCGAGGA GGCACCGTCC ACGGAGGGCG AACCGTTCCT GGCCCCCGTC
GCCGACGATC TCGTCGGGCC CGCCGTGCGG CGGTTGCGTG CTGACCTGGA GCGGTTGTGT
GAGCGGGCAG CGCGGTTCGA CCCGGCCGCG CTTGTCGAGC AGTTGCGGAC CGGACTCGCG
TGGCGGCTGC ACGCCATGCT GGGGCGGACG ATGACGCTGG AGCTGCACCT GGCCCGCAAC
CGGGGTGAGC TGACCGCCGC GGAACCGGCC GAGCGCTTCG CCCAGTTCCT CACGCTGGCC
CGGGATCCGG CGTGGCGGCG CGGCCTGTTC TTCAGGTATC CGGTGCTGGC CCGGCAGCTG
ACGATCGGCG TCGAGCAGTG GTACGCCAAC AATCTCCGGC TGGCCGAACG GATCGCGGCC
GACACCGAGG TGCTGAGCCG CCGCTTCGCC GACGGGGCGG ACCTGGGGAA GGTCACCTCG
ATCAGCGCCG ACGCCGGTGA CCAGCACCGG GGTGGGCAGA CGGTCGCGAT CGTGACCTGG
GACAGCGGGC TGCGTCTGGT GTACAAGCCG CGATCGATGC GGCTGGACCA GACTTTCAGC
GCCCTTGTGG ACTGGCTCAA CGACGCCGGA CTCACCCATC CGCTGCGCAC CGTCGAGTGC
CTGGATCGCG GCGACTACGG GTGGAGTGAG TTCCTCGTCG CCGAACCCTG CCGGGATGCG
GCGGGGGTGC GCCGGTTCTA CCACCGGCAG GGAGCGCTGC TGGCGCTGCT GGGTCTGTTG
CGCACCAACG ACATGCACGC CGAGAACCTG ATGGCCCTCG ACGAGCAGCC GGTGCTCGTC
GACCTGGAGA CGCTGTTCCA GCCGCGGCTG CCCGACACCA ACGAGCAGCT CACCGGCGCC
GAACAGCTCG CCCAGCAGGC CACCGCCGCG TCGGTGCTCC AGGTGGGGCT GCTGCCCGCG
CCAGCCTGGG TGACCCGCGA GGGGCGCGCT GTCGACATCA GCGGGCTCGG GCACCTGCCC
GGTCAGCAGA CCTCGATGCC GGTTCCGACG CTCAGTGGCA TCGGCACCGA CGACATGCGG
GTCAAACTCG AACGCGTCGC CATGGACCTG CCCGACCACC GGCCGGTCGC CGCCGACATC
CCGCTCAACC TGCTCGACTA CGCCGACGAC CTGCTGGCCG GTTACACCGA GATGCACCGG
CTGTGCCGCA CCAGGCGCGC GGACCTGCTC GCCGAGGACG GGCCGCTGGC GGCGTTCGGC
GGAATGCGGG TACGCGTCCT GTTGCAGTCC ACTGTGACCT ATTCGACGCT GTTCCGCACC
GGGTTCCACC CCGACGTGCT GCGCGACGCG CTGGATCGCG AGCGCCACTT CGACTTCCTG
TGGCGACGGA TCGAACGCAC CCCCGCCCTG ACCGCCGCCA TCGCGGCCGA GCGCCGGGAC
CTGTGGCGCA ACGACGTCCC GTATTTCGAG GCCGACACCG ACGGCCCGGT CGTGTATGAC
AGCGAGGGTG CCGCCGTCGA AGGCCTGACC GTCATCGGCG GTCTCGACCT GACCCGGGAC
GCGTTGCGCG ACTGGGACGA GGAGCACCTG CGTGAGCAGC TGGCGCAGAT CCGCGGTTCC
CTGGCGGCGG CGGCCATCAA CACCGTCGCC CGGTTCGAGT ACCCGGTGTA CTCCAGCCCC
GAAGTCGCCG AACCGGCCGC ACCCGAGGAG TTCGTCCGGG CCGCCGACCG GATCGGCGTC
CACTTGCGAT CGCGGGCCTT CGTCGCCGGG GACAGTGCCC AATGGCTCGG GCTGAGCTCC
CACATGGGAC GCAACTGGTC GCTGGGGCCG TTGACTCCCG ACCTGTTCAA CGGGGTCGCC
GGGGTGGCGC TGTTCCTCGC CGAGCTGTCC CGCGCCACCG GCGACTCGTC CTATGCCGTC
CTGGCCCGGC AGGCCACCGT GACCATCCGT CGGCAGGTGG AACGGGATCC GCACATACTC
CACGGCATGG CGGGGCTGCC GGGCATCGCC TACACGTTCT GCCGTCTCGC CGACCTGCTC
GGCGACGAGT CGCTGCGCGA CGACGCGGTC GGCCTCGCCG AACGCACCCG CGCCCACGAC
TCTCCCGACG CCGAGTTCGA CATCGTGGGC GGGGCCGCCG GAACCATCGC GGCGCTGCGC
GTCCTGCACG ACCAGCGGCC CGAGTCGCCG GCCGCCGAGG TCATCCGCGC CGCCGCCGAC
CGGCTGCTCG ACGCCGCCGA GGCGCAGGAC GCCGGAATCG CCTGGCTGCC GGCGATGATG
CGCGAGAACA ACCTCGCCTC CCGGCCGCCG TCGGGTTTCG GCCACGGCAC CGGCGGCATC
GCCTGGGCGC TGGCGCAGGC GGGAGGAGTC CTGGGCGAGG ACCGTTACGC GCGCGCCGCC
CAAGACGCGA TCACCTACGA ACGCAGCCTG TTCCGGCCCG GCGACGGGAC CTGGCAGGAC
GTCCGCGACC CCGACGGCAA GGCGATGACC TGCGCGTGGT GCCACGGCGC CGTCGGCATC
GGACTGTCGC GTGTGGGCAT GCGCGACCTG GTCCCAGGCG ACCGCGCCGC GATCGACGAG
GAGATCACCG TGGCCCTGGA CACCGCGCGA CGCGACGGCT TCGGGATCTC GCATTCGCTG
TGCCACGGCG ACATGGGAGC CGTCGAACTG TTTCTGTCGG CCGCGAGTCT CCACGACGGA
CCCGAGCTCC GCGACGAGAC GATACGGCGC GCGACCTCGG TACTGCGCAC AGTGGAGACC
GAGGGCTGGA TCTGCGGGCT GCCGTTCGGC GAACCGACGC CGAGCCTGAT GGTCGGCCTG
GCCGGTATCG GCTACGGGCT GCTGCGACTC AACGATCCGA CGCGGGTGCC GTCGGTGCTC
ACCATGGCGG TGCCGACACC GCCGCAACGA ATCCAGCGAT AG
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| Protein sequence | MKPEAGVADV PASGFASLAT ERTTVNFVSD PRTAALHLAE PLADRLASTP LTDGSEATAR
LERWRDREPF DNERHWRDRL AADGLDEDLL ARLLGETSAD LERRLPRPWW TGWLTEAATE
PQVAPEEAPS TEGEPFLAPV ADDLVGPAVR RLRADLERLC ERAARFDPAA LVEQLRTGLA
WRLHAMLGRT MTLELHLARN RGELTAAEPA ERFAQFLTLA RDPAWRRGLF FRYPVLARQL
TIGVEQWYAN NLRLAERIAA DTEVLSRRFA DGADLGKVTS ISADAGDQHR GGQTVAIVTW
DSGLRLVYKP RSMRLDQTFS ALVDWLNDAG LTHPLRTVEC LDRGDYGWSE FLVAEPCRDA
AGVRRFYHRQ GALLALLGLL RTNDMHAENL MALDEQPVLV DLETLFQPRL PDTNEQLTGA
EQLAQQATAA SVLQVGLLPA PAWVTREGRA VDISGLGHLP GQQTSMPVPT LSGIGTDDMR
VKLERVAMDL PDHRPVAADI PLNLLDYADD LLAGYTEMHR LCRTRRADLL AEDGPLAAFG
GMRVRVLLQS TVTYSTLFRT GFHPDVLRDA LDRERHFDFL WRRIERTPAL TAAIAAERRD
LWRNDVPYFE ADTDGPVVYD SEGAAVEGLT VIGGLDLTRD ALRDWDEEHL REQLAQIRGS
LAAAAINTVA RFEYPVYSSP EVAEPAAPEE FVRAADRIGV HLRSRAFVAG DSAQWLGLSS
HMGRNWSLGP LTPDLFNGVA GVALFLAELS RATGDSSYAV LARQATVTIR RQVERDPHIL
HGMAGLPGIA YTFCRLADLL GDESLRDDAV GLAERTRAHD SPDAEFDIVG GAAGTIAALR
VLHDQRPESP AAEVIRAAAD RLLDAAEAQD AGIAWLPAMM RENNLASRPP SGFGHGTGGI
AWALAQAGGV LGEDRYARAA QDAITYERSL FRPGDGTWQD VRDPDGKAMT CAWCHGAVGI
GLSRVGMRDL VPGDRAAIDE EITVALDTAR RDGFGISHSL CHGDMGAVEL FLSAASLHDG
PELRDETIRR ATSVLRTVET EGWICGLPFG EPTPSLMVGL AGIGYGLLRL NDPTRVPSVL
TMAVPTPPQR IQR
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