Gene Snas_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3426 
Symbol 
ID8884625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3628802 
End bp3629212 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID 
ProductProtein-tyrosine phosphatase low molecular weight 
Protein accessionYP_003512183 
Protein GI291300905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.328132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.592899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA AACCGGAGGT CCTGTTCGTT TGCGTCCACA ATGCTGGACG ATCCCAGATG 
GCCGCCGCCA TCTTGGATCA TCTCGCCGCC GGACGTGTCG CGGTGCGCTC GGCCGGTTCG
GCCCCTGCCG AGTCGATCAA TCCCGCCGTG GTGGAGGCGT TGGCCGAGAT CGGCCTGGAC
GTCAGCAAGG AGTTCCCCAA GAAGCTGTCG GACGAGGCGG TGAGAGCCTC CGATGTGGTC
ATCACGATGG GGTGCGGCGA CGCCTGCCCG GTGTATCCGG GGAAGCGGTA CCTGAACTGG
GAACTGGACG ACCCGGCCGG GCAGCCGGTG GAGAAGGTGC GCGCCGTCCG CGACGACATC
CACGTACGGG TGCGCAAGCT GCTGGCCGAA CTCGACGTCC CCGCCGCCTG A
 
Protein sequence
MSGKPEVLFV CVHNAGRSQM AAAILDHLAA GRVAVRSAGS APAESINPAV VEALAEIGLD 
VSKEFPKKLS DEAVRASDVV ITMGCGDACP VYPGKRYLNW ELDDPAGQPV EKVRAVRDDI
HVRVRKLLAE LDVPAA