Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3404 |
Symbol | |
ID | 8884603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3607206 |
End bp | 3608489 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003512161 |
Protein GI | 291300883 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.226025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0787607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CCGATCAGCC GCTGGCCGCC GTCTTCACCG TGCTCAACGG GCCCCTGGAC CAGCTGCTGG GCCGGTTCTC CGCGCTGCTG CGGGACCTGG TTCCGCACGA GGCGCTGGCG ATGCTGACCG GCGACTGCTC CCGCAACCCG CTCATCACCC ACGGCGATCC CGCCGTGGCC GAGCGCGTCG TCACCGCCGA GCTCAACCAG CTGGGCGCCG TCACCGGGGT GACCCGGCCG TGGTGGGGAC AGGCGAAACT GGCCGGGCGC ACCCGTCCGG TGCTGGCGGT GGCGTCCCAT CCCCGGGGTT CGGCGGGCGC GCTGCTGGCG GTCGCGGCCC ACGAGCCGCG ACCCAGCACC GAGGTTCTGG CCACCGTGCA GTCGATGTGG GATCTGATCA CGCTGCACGT GGCCGACCGG GCCGGGGACG TCGAGTCGCC GCAGCTGGTC ATGACCCATC GGCTCGTCGC CGAGGAACGC GCCCGGGTGG TGACCGAGCT GACCGAGTCG CATTCGGCCA CGATCGTGTC GCTGCTGGCG GCGTTGCGGT CGAGGACACT GAGCGACACC GCCGCCCGGC AGGTCGCGAC CGACCTGGCC GTCAACGCGT TGATCGACCT GCGCACCACC GGCGACTGGG ACCGGGTGAT CAGTCAGGAG GTCGCCGAGG ACGCGTTCAC GCGGCTGGCC GACCGGTTGC GTCCACTGTC GCGTTACGGC GATGTCGAGC TGGAACTGGT GCCGCCCAGC CAGTCCCAGC GGGAGCTGCC GGGTCAGGTG GCGCGGGTCG CGCGGACGAT GTCGCGGGCG GTGGTGCTGG TGCTGCTGGA GCAGGGCGGT GTCGGCCGGG TACGGATCAC CTGGGACGCG GGCGATGCCG CGCTGCGCAT CACGATCCGC GACGACGGTT CCGGGCACGT TCCCCGTCGG GCGCTGGAAT CGTTGCGCAC CAACGATCGA CTGGGCCCGC TGTCGGGGAC CTTCACCGTG GACGCGGTTC CCGGCTGGGG TACCGCGGTG ACGATCACCG TGCCGCTGGC GGTGCCGTCG GCGACTCGTC CGGCGCCGCT GCCGGAGCTG AACCCGCGCG AGCTGGACGT CCTGGCGAAG CTGGCCGGCG GCTTGCGCAA CCGTCGCATC GCCGAAGAGT TGCACATCAG TGAGAACACC GTGAAGTTCC ACGTCGGCAA CATCCTGCAA AAACTCGGTG TGGCCTCCCG CAACGAGGCC GCGGTGCTGG CGCGCGACGC GGGCATCGAC GCCGCGACGG TCAGCGCGGG CTAG
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Protein sequence | MTTPDQPLAA VFTVLNGPLD QLLGRFSALL RDLVPHEALA MLTGDCSRNP LITHGDPAVA ERVVTAELNQ LGAVTGVTRP WWGQAKLAGR TRPVLAVASH PRGSAGALLA VAAHEPRPST EVLATVQSMW DLITLHVADR AGDVESPQLV MTHRLVAEER ARVVTELTES HSATIVSLLA ALRSRTLSDT AARQVATDLA VNALIDLRTT GDWDRVISQE VAEDAFTRLA DRLRPLSRYG DVELELVPPS QSQRELPGQV ARVARTMSRA VVLVLLEQGG VGRVRITWDA GDAALRITIR DDGSGHVPRR ALESLRTNDR LGPLSGTFTV DAVPGWGTAV TITVPLAVPS ATRPAPLPEL NPRELDVLAK LAGGLRNRRI AEELHISENT VKFHVGNILQ KLGVASRNEA AVLARDAGID AATVSAG
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