Gene Snas_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3391 
Symbol 
ID8884590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3592854 
End bp3594116 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content64% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003512148 
Protein GI291300870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.351493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC AAGTGTTCAT CGCCGCCGCG GTCGCCGCGG TCCTCGTCAC CGGTTCGGCA 
GTAGCCCTGG CCGACCCCTT CGACGCCGGT TCCGGCTCTG ACAAGTCCAC ATTGAATAAC
GACTTGCTGA ACCAGAAGAT CGAGGCCCTG CACGAGGCTG GCGCCCCGGG TGTCATCGCC
GAGGTCCGCG ACGGTGACGG CGTGTGGGAA GGCTCCGCCG GTGAGCGGGT CATCGGCGAC
AACAAGAAAC CCGACCCCAC CGACCGGGTC CGGGTCGCCA GTCTCACCAA GTCCATGATC
GCGACCGTCA CCCTGCAGTT GGCCGACGAA GGCGAAGTGG ACCTCGACGC CCCCATTGAC
GAATACCTGC CCGACGTCCT GCGCTACGAA GAGACCATCA CGGTGCGGCA GCTGCTGAAC
CACACCAGCG GCCTGCGCGA CTACTTCGTC CACATCTACG GATCGCTGCA CAATGGTGAC
CCCTCCGACG TGCGCACCAA CCGGTTGAAC AAGTACACGC CCAAAGAGAT CATCGGCATG
GCGACCGAAG AGCCCCTGCT GTTCGAGCCT GGCACCAAGT TCTCCTACGC CAACACCGGT
TACACCGTGA TCGGTCTGCT GATCGAGAAA CTCACCGGCA AGTCGATTCA GGACGCTGTC
GACGAGCGGG TGCTGGAACC GGCGGGAATG AACGACTCCT ACCTGGCCAA GGAAGGCCAG
CTGATCGTGG ACGGTCCGCA CCCCAACGGT TACTTCGACA ACGGTGACGG CACGGAGATG
ATCGACGTCT CCGACATCGA CCCGTCGCAG TTCTGGTCCG GTGTCGCGGC GGTGTCCAGC
CCGCGCGACA TCAACCGCTT CTACCGGGCC ATGTCCGACG GAACCCTGCT CACCCCCGAG
CGGCTGGCCG AGGCCCGCGA CCTCACCCCG CAGTCGGACA AGACCTACGG CCTGGGCCTG
GACTCGTTCA AGGTCCCGGA CAACTGCGCG CCGGTACCGA GCAAGGCCGC CTACGGACAC
ACCGGTGACG GACTGGGCTA CATCACCTTC TCCGGCAGCT CCCCGGACGG GGAACGTCAG
GTGACCTTCG CCTTCACACT CGGATACGAA CTCAACCCCA CTGTCACCGA GAAACTGCGG
AAGGCATGGC GGGGTCTCTT CTACGCCGGA CTGTGCGATA TCGACACCGA CAAGCCGACC
GTCGCCAAGA CCCTGCCGGA CGAGGACCCG CTGAGCCTGC AAGCGACGTT CCGCCAGACC
TGA
 
Protein sequence
MRKQVFIAAA VAAVLVTGSA VALADPFDAG SGSDKSTLNN DLLNQKIEAL HEAGAPGVIA 
EVRDGDGVWE GSAGERVIGD NKKPDPTDRV RVASLTKSMI ATVTLQLADE GEVDLDAPID
EYLPDVLRYE ETITVRQLLN HTSGLRDYFV HIYGSLHNGD PSDVRTNRLN KYTPKEIIGM
ATEEPLLFEP GTKFSYANTG YTVIGLLIEK LTGKSIQDAV DERVLEPAGM NDSYLAKEGQ
LIVDGPHPNG YFDNGDGTEM IDVSDIDPSQ FWSGVAAVSS PRDINRFYRA MSDGTLLTPE
RLAEARDLTP QSDKTYGLGL DSFKVPDNCA PVPSKAAYGH TGDGLGYITF SGSSPDGERQ
VTFAFTLGYE LNPTVTEKLR KAWRGLFYAG LCDIDTDKPT VAKTLPDEDP LSLQATFRQT