Gene Snas_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3374 
Symbol 
ID8884573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3571329 
End bp3572603 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content72% 
IMG OID 
Productacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase 
Protein accessionYP_003512131 
Protein GI291300853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG CGATCACGGC CACCGAGGCC AAGGCACTGG CGGCCGTCGA CGAGACGATG 
ATCCGCGAGC TGCTGCTGGA GTACCTGGCC ATCCCGAGTG TCACCGGAAC CGCTGACGAG
TCCCGGATGC AGCACGTCCT GGCACGGCGC CTCGAACTGC TGGGCCTCGA CGTCGACCTG
TGGTCGATGG ACCTGCCCGC GCTGCGCGCG ACCCCGGGGT TCCCCGGCAC CGAGGCGCCC
CGGGAGGAAG CCTGGGGCCT GGTGGGAATC ACCGACGCCG ACCGCGACGG GCCGACGATG
ATCCTGCAGG GGCATGTGGA CGTCGTGCCG CCGGGTGATC GCGGCAACTG GGCCCAGGAT
CCGTTCACGC CAACGGTTGT CGGCGATGTC GTGTACGGCC GGGGCGCGTG TGACATGAAG
GCGGGGGTCG TGGCGAACCT CGCCGCGCTG GCCGCGATCA AGGCTAGCGG GGTCACGCCG
CCCGGGCCGG TGGCGGCGCA TCTCGTCGTC GGTGAGGAGG ACGGCGGCCT GGGGGCCTTT
GGGACACTCC AACGTGGGCA CACCGGCGAC GCTTGCGTCA TCACCGAACC CACCGGCGGA
ACCCTGATGA CGGCCAACGC CGGTGCGCTG ACGTTTCGCG TCGAGGTGAC GGGCAAGGCC
ACTCACGCCA GCACCAAGGA CGCCGGGGTC AGCGCCATCG ACGCCTACAG CCCGATCGCC
GTGGCGCTGG CCGAGCTGGA ATCGCACCGC AACAACGCAC CGGACCCGTT GTTGAGCGAG
TACGCCACGC CCTACGCGCT GTCGGTGGGA ACCCTGCGCG CCGGGGACTG GGCCAGCAGC
GTGCCCGACC TGCTCGTCGC CGAGGGCAGG CTCGGGGTGC GACTCGGCGA GGATCCCGCC
GCCGCGCGCG CCGAGTTCGA GACCTGCGTG GCCGACGCCT GCGCGCGGGA TCCGTGGCTG
CGTGATCATC CGGCCGTCGT GACCTGGCCG GGCGGCGCGT TCGCCAGCGG CAGGCTCGCG
GCCGGGCATC CGTTGCGCGA CATCGTGGCT GGCGCGTTCG CCGACGCGAC GCGTCGCCCG
CGTCCGCGCG AACGCGGGGC GCCCTACGGC AGCGATCTGC GGCTGTACGC GGCGGCGGGG
ATCCCGACCT TGCAGTTCGG TCCCGGCGAC GTCGCGGTGG CGCACAGCCC GCGCGAGTGC
GTCAAGCTGT CCGACGTCGC CGAGGTGGCG CGGACGCTGG TACTCACGGT CCTACGTGGA
GGATCGGTGG CCTGA
 
Protein sequence
MTTAITATEA KALAAVDETM IRELLLEYLA IPSVTGTADE SRMQHVLARR LELLGLDVDL 
WSMDLPALRA TPGFPGTEAP REEAWGLVGI TDADRDGPTM ILQGHVDVVP PGDRGNWAQD
PFTPTVVGDV VYGRGACDMK AGVVANLAAL AAIKASGVTP PGPVAAHLVV GEEDGGLGAF
GTLQRGHTGD ACVITEPTGG TLMTANAGAL TFRVEVTGKA THASTKDAGV SAIDAYSPIA
VALAELESHR NNAPDPLLSE YATPYALSVG TLRAGDWASS VPDLLVAEGR LGVRLGEDPA
AARAEFETCV ADACARDPWL RDHPAVVTWP GGAFASGRLA AGHPLRDIVA GAFADATRRP
RPRERGAPYG SDLRLYAAAG IPTLQFGPGD VAVAHSPREC VKLSDVAEVA RTLVLTVLRG
GSVA