| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3337 |
|---|
| Symbol | |
|---|
| ID | 8884536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3534209 |
|---|
| End bp | 3536398 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003512096 |
|---|
| Protein GI | 291300818 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.154521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCACCT ATGCCCAACT GACCGCCATG AACACTTCCA AGCTCACCTC CGCCGCCCAG
GCCAGCGCGG ACTTCGGGAC CGCCATGACA CGGCAGGGCG AGGCGGTGCA GACCGCCGCC
GACATTCCCG CCGGAATGTG GGCCGGTGGC GACGCCAACG CCGCGGGCGG CATGTTGGCC
GCGTTGCCGG GTCCGCTGTA CGACCTGTCC GACTCGGCCA AACGCGGCAA GGCGACACTC
GACGATCTGG CGACCGGAGT CAACAAGGCC AAGGCACACC TACAGGGGGC ATACGACGCC
ATCAAGGGCA CCGGCATCAC CATCCAGCCG GACGGCACCG TGGTCACGCC GGTGGTCACC
GATCCGGCGG TGGCCGCCGA GAACGACCGC AAGGCCCAGG ACGCGCGGGC CATCATCGAC
GAGGCGTTGA AGATGGCCGC CGACGCCGAC ACCACGGCGA CGGAGCAGCT GAACGCGCTG
TCGGGCCAGG TGAACGCTTC CTATATGGAG ATTCCCGGGA AACAGCAGGA TCTGGGCCGG
GCCAAGGACC TCCTGAGCAC CCCGAAGAAC CAGGTCAAAC CCGAAACCGC GCAGGAACTC
AACGACATCC TGTCGCGCAA CAACAATCCC GAGTTCAACC GGCAGCTCAT GGAACAGCTC
GGGCCCAAGG GTCTGATCGA CGGCAGCGGG CGGTTCTCGG AGGCGGGCGC GAATCTGGCG
CAGAACGGTG ACACCGCCGG AGCGGACAAG TTCAGGGAAA CGCAGCGCCT GCTGGGAGAG
TCGCTGGCGT CGGCGTCACA GAACGGCGGG CTGACTCCGC AGTGGACGCA GGAGTTGATG
AACCAGGGTG CCAAACCCAT GGAGGGCAAC CCGCAGAACA TCGGCTACGA AGCTCTGGCT
CCGCTGCTGG AACACGGCAA GTACGACCCG AGTTTCCTGA CCCCGGTGGC CGAGCACGTC
ACCAGGCTGG ACAACTCCTC CGGGCTCGGG AACCCGTCCG CTGGCCCCGG CGCGAGCGTG
AGCGGGCTCG ACAGCAACCC GTTCGTCATC GACGGAAAGG CGGACCACGA AGCGCCGGTC
AGCAATCCGC TCAACTCGGT GATGACCGCG CTGGACCACA GCCCCGAAGC GGCGTCGGAC
TACTTCACCG GCAACAACGA CGAGCACGGC CTGAAATACA ACGACGCCTT CGGCAAACCG
CTCGCGCCGA TCGAGGGACC GACCGACAAC CCCAACATCG ACTACGCCCT GGATCGTGTC
ACGGGTCAGG AGCCCGGCGA CCCCTTGGAC GTCAACCGTG TCGGCAACGC GTTGGAGGCC
GCAGCCACCG GGGTGCCCTC CGACACGCCC GCCGACGCAC CGCGTCCGCC TCGGACCGAG
GAAATGGTGA ACATCGCCGA GCACCTCGTC AACCGCTTCG GCGGTGAAGG CGACGGCGAC
ATGGACCTCA TCCCGGGCGG CAAGCTCGAG AACATGGCCG ACAACATGAC CGATATCGCC
TCCACGTACA TGCCCGAGAT CCACAACTCC TTCCTGAACC CGCTGTCCGG GGACGCGAAG
CTGTACCCGG AAGGCGCCAT GGCGGAGTTC AAGGACGAGG ACGCCACCGC CGGACTGTTG
CACGCCCTCG GCCGACACGA GGATTCGTTC CACCAGCTCA TGGGCGCCAG CAACGACATC
CGCGATGTCG TGCTCGCGCA GGAGTACCAG CAGAACGGCC CGGAGGGCAG CTGGGTGCAG
GAGGCGCTGC AACCCGGTTC GACCATCGCC AACATACTCA CCGATGCCCA GGTGGAAGCC
GGTGTGCACG ACGCGGCGGA GTCCGACAAG TCGGCCAACG ATCTGACCCA GCTGGGCGTC
AGCGGCGGCA AGATCGCGAC CAGCGCCATT CCGTTCGGGG GCGCCCTCAT CGGCGAGATC
CTCGACCAGG TCAAGAACGA CGCGCAGGTC GATTCCACGG AACAGGCGCT GTACGACGGG
AACGTGGAAC GGACGGACGT GTACGACGCG CAACTTGTAC GCGAGAAGGC CGCCATCGAG
CACCTTGTCA ACCAGGACGG TGTCGTCACC GAGGCCGAGA AGACGCTGTT GAGGAATGTG
GACGGCGAGA TCAATGACGC CTGGTCGGCT GGCGAGAACG AGGTGGCGCA ACGCAAGGTT
GACGGTATGG GCGCACCGGG TGGCAAGTAG
|
|---|
| Protein sequence | MVTYAQLTAM NTSKLTSAAQ ASADFGTAMT RQGEAVQTAA DIPAGMWAGG DANAAGGMLA
ALPGPLYDLS DSAKRGKATL DDLATGVNKA KAHLQGAYDA IKGTGITIQP DGTVVTPVVT
DPAVAAENDR KAQDARAIID EALKMAADAD TTATEQLNAL SGQVNASYME IPGKQQDLGR
AKDLLSTPKN QVKPETAQEL NDILSRNNNP EFNRQLMEQL GPKGLIDGSG RFSEAGANLA
QNGDTAGADK FRETQRLLGE SLASASQNGG LTPQWTQELM NQGAKPMEGN PQNIGYEALA
PLLEHGKYDP SFLTPVAEHV TRLDNSSGLG NPSAGPGASV SGLDSNPFVI DGKADHEAPV
SNPLNSVMTA LDHSPEAASD YFTGNNDEHG LKYNDAFGKP LAPIEGPTDN PNIDYALDRV
TGQEPGDPLD VNRVGNALEA AATGVPSDTP ADAPRPPRTE EMVNIAEHLV NRFGGEGDGD
MDLIPGGKLE NMADNMTDIA STYMPEIHNS FLNPLSGDAK LYPEGAMAEF KDEDATAGLL
HALGRHEDSF HQLMGASNDI RDVVLAQEYQ QNGPEGSWVQ EALQPGSTIA NILTDAQVEA
GVHDAAESDK SANDLTQLGV SGGKIATSAI PFGGALIGEI LDQVKNDAQV DSTEQALYDG
NVERTDVYDA QLVREKAAIE HLVNQDGVVT EAEKTLLRNV DGEINDAWSA GENEVAQRKV
DGMGAPGGK
|
|---|
| |