Gene Snas_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3325 
Symbol 
ID8884524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3516070 
End bp3517278 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512084 
Protein GI291300806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0514676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.538152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAC TCCTTCGCAC CGACGTCGAT ACCGCCTCCC CCGCCCGATC CACGGCCAGG 
ATCGTGGGCC TGGATCTGGC TCGCGCGCTG GCGGTGTTCG GCATGTTCTA CGCGCATGTC
GGCCCGGTAT CCGAGGACGA CTCCGGGTTC GGTTCCTGGC TGATGAGTTT GCCGCACGGC
CGCTCGTCCG CGTTGTTCGC CACCCTCGCC GGGCTAGCGC TGGCGCTGCT CAGCGGCGGT
GCCACACCCC GCACCGGACG CTCGGGGCGT CAGGCACTGA CCCGGATCGT GATCCGGGCG
GCATGCCTGC TGGCACTGGG GACGGCGTTG ACCGCCTGGG GCACCTCGGT CGACGTGATC
CTGGCGTACT ACGGCCTGTA CTTCCTGCTG GCGCTGCCGT TCCTGCGGCT GTCGGCCCGG
AGCCTGTTCA TCGCGGCGGG TGGGTTCGCG CTGCTGGGGC CGCTGGTGCT GCACGGCCTG
TGGTACCTCG GTTCCGACTG GGTGGCGGCC GTGGACCGCG TCGACCCGTT CGCATGGTGG
GGCAACGGCG TGCTGTGGCT GCTGTTCTTC GGAACCTACC CGGCCGTGAC GTGGATGGCC
TACGTCCTGG CCGGGATGGC GCTGGGGCGT CTCGACCTCG CCGCCACGGC GACCCGGGTG
CGCCTGGCGG TCGCGGCGGT GGCGGCGATG CTCGCCGGAT ACGGCGTCTC GTGGCTGATC
GGGTTCCTGT TCCCACGACT GGAGGCGTTC GCGGCCTCGT CGAGTTCGAG CATGTCCAGC
GAATCGTCCA GCGAGATCAG CGACGAGGCA CTCAAGTACG ACTTCGTACC GGACTCGCCG
TCGTGGCTGC TGGTGGCCGA ATCGCACAGC GGCACCACCT TCGAACTGGT GGGCAACATC
GGCGTGGCCA CGGCGGTGAT CGTGGCGGCG GTGACGCTGC TGAACCGGTT CCGGCGAGCA
CGCTGGTGGC TGGCCCCGGC GATCGCGGTC GGCACCATGT CGCTGACGGC CTACGTCGCG
CACATCGCCG GAGTGTGGTT CCTGTTGGAC ATCAACGAGT ACGGGTTCGC GATATCGCCG
TGGCTGTTGT GGGGCGCCTT CGTCGTGGTC ACGATGTTGC TCGCGTTGAC CTGGAAACGC
TTCTTCACCC GCGGGCCGCT GGAATACCTG CTGCACGCGG CGACCCGGGT CGCGGCGCGA
GTGCGCTGA
 
Protein sequence
MTTLLRTDVD TASPARSTAR IVGLDLARAL AVFGMFYAHV GPVSEDDSGF GSWLMSLPHG 
RSSALFATLA GLALALLSGG ATPRTGRSGR QALTRIVIRA ACLLALGTAL TAWGTSVDVI
LAYYGLYFLL ALPFLRLSAR SLFIAAGGFA LLGPLVLHGL WYLGSDWVAA VDRVDPFAWW
GNGVLWLLFF GTYPAVTWMA YVLAGMALGR LDLAATATRV RLAVAAVAAM LAGYGVSWLI
GFLFPRLEAF AASSSSSMSS ESSSEISDEA LKYDFVPDSP SWLLVAESHS GTTFELVGNI
GVATAVIVAA VTLLNRFRRA RWWLAPAIAV GTMSLTAYVA HIAGVWFLLD INEYGFAISP
WLLWGAFVVV TMLLALTWKR FFTRGPLEYL LHAATRVAAR VR