Gene Snas_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3317 
Symbol 
ID8884516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3505574 
End bp3506065 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512076 
Protein GI291300798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0555591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGT TCGCGTTTCG TCCCATGGCC GAAGCCGACC TGTCCGATGT GGTCAGGTGG 
CTTCCGGCCG GGTTCGATCT GGCCGCCGCC AGGGACAAGT ACCTGCCCTG GATCCGCGGC
GAGCACCCCA ACCACCTGAC CCTCATCCTC GCCGACGGAC ACCCCTGCGG TTTCGCCTGG
CATTACCGCG TCGGCGACCA CCGCGAGTAC AGCCTGGCCA CCGGCGAACC CGACGCGATC
GGGATCGACG TCATCGTCGG CGATCCCGGC GTCGGGGACC ACGCGGCGCT GCTGCGGCAG
TACCTGCGCC AGGTCGTGCT GACGGCACAC CCCGACGCCA CCCGCGTCAT CTCCAGCCCG
GCGGCCGACG ACCTGTCGGC CGTGCGCATG CTGACCGGCG CGGGATTCAC GCCGCTGCGC
GACATCACCG TGTTCCCCGG CGAACCGGCC GAAACCCTGT GCGCCTTCAC CGTGGGGGAT
ACGAACGACT GA
 
Protein sequence
MTAFAFRPMA EADLSDVVRW LPAGFDLAAA RDKYLPWIRG EHPNHLTLIL ADGHPCGFAW 
HYRVGDHREY SLATGEPDAI GIDVIVGDPG VGDHAALLRQ YLRQVVLTAH PDATRVISSP
AADDLSAVRM LTGAGFTPLR DITVFPGEPA ETLCAFTVGD TND