Gene Snas_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3294 
Symbol 
ID8884493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3481628 
End bp3482323 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512055 
Protein GI291300777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.900451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.652925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA ACGCGCTGAC CAGTACGTCA CTGTCCCTGT TCGACGCCGT TGGCGGCTGG 
CGCACCGTCG CCGAGAGTAT GGCGTCGCGG GTGCTGTTCC TGGTCACGTA TCTGCTGACC
GAGGAGGTGC TGACCGCCGC GCTGGTGGCC GTCGGCGGGG TGCTCGTGTT CGTCGTCGTG
CGGATCTGCA CCGACCGCAA GTATCTGGCG GCGGTGGTCG AACTGAGTGT CGTCTGCTTC
TCGGCGCTGT TGGCCGGGGG CACCGGCCAC GCGGCCAACT TCTACCTTCC CGCCCTGTTC
ACCAACATCG GCCCACTGGT GGTGTTCCTC GTGTCGATGC TGGTGCGGTG GCCGGTGATC
GGGCTGGTGG TGGGAACGGT GCGGGGCGAA CGGTTCGCGT GGCGGCGAGA TCCGGTACGG
CGACGGCGTT ACCAACGCTG CACGGCGATG TTCCTGGCGA AGTTCGCCAT CGCCAGTGCC
GTGATGCTGC CGCTGTACCT CGCCGAACAC GTCACCGCCC TGGGCATCGC GAACATGCTG
CTGACCTCGC CCGCCGCCGG TGTGTGCGTC TACGTGAGCT GGCGGATCCT TCGCGTCCCA
ACGGATCCGG CGAGCCTGGG AAGCCGGTGC CCGTCCTTAC GCCGTCATCG GGGTTCGTCG
CTGGCACGTC GTCTCACGAC CGTCATCGAC ACCTGA
 
Protein sequence
MNLNALTSTS LSLFDAVGGW RTVAESMASR VLFLVTYLLT EEVLTAALVA VGGVLVFVVV 
RICTDRKYLA AVVELSVVCF SALLAGGTGH AANFYLPALF TNIGPLVVFL VSMLVRWPVI
GLVVGTVRGE RFAWRRDPVR RRRYQRCTAM FLAKFAIASA VMLPLYLAEH VTALGIANML
LTSPAAGVCV YVSWRILRVP TDPASLGSRC PSLRRHRGSS LARRLTTVID T