Gene Snas_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3293 
Symbol 
ID8884492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3480498 
End bp3481679 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512054 
Protein GI291300776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.601021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.530964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGC TCTTCGACGG CGAGTTCAAC GTCAGCTACG GCCAGCTGTA CCTCGACGGC 
CGCATCGATC CCGATGAGGG AGCGGAGCCG GATCTCGACA ACTGTTTCAT GGGACAGACC
GTGGGTCTGA TGGGAGCCGC CATACCCGGG CACCTGTTCG TGTTGACCGG CACGCACAGC
GGCTCGGTGC CGCTCACCGT CGAGGTGCAC GAGACCGAGC CGTCGCTGGA CGCCGACGCC
TGGGAGGACG TTGTGGAGGT TTCGTTCGAG TCCGACGCGG ACGAGGTCGC GCTGATCGAG
TGGGACGGTG ATTTTCAGAG CCTCGACTTG TCCCCCGGTT CCTATCGGGT CCGTTACCTC
TGTCGCGGCA TGGATGCCGC CAGCGGTCAC GACCGTTTCG ATGACGACCC GGTGGTGGAC
GAGTACCTGC TCCAGTTCTG GCCAGCCCCG CCGCAGCGCG ACCGCATAGT CAAGGAGACC
AGTCGCTCCG CCGCGTACTG GCGCCGCGTC GCCGCCGAGG TGCCACCGCC GCCCTCGCCC
GAGGAGGTGG CCGAGGCGAA GCGGATCGCC GACGAGCGGG CGGCGGAGAA ACGACGTCGG
TACGCCGAAC GGGAACGGTG GGGTGAGTAC TCACCCAGCG ACCGGCTGCG CGGCCTCGGC
GGCCACGTGA GCAAAGTGGC CAAACGTGAC CCCGCGCTGG CGCACGCGAC CGAAGCGGCC
GGACCGGACG TTCAGCGGGC GATCGCGTGC TGGGCCGCGC GCCGGTTCTG TGACGCGACC
GGGCTCAGCG ATGTGGACTG GATCGCCGAG GGTCTGTCGC AGCTGGAGCG CGGAGTGCCG
TTGTCGCCGC CGTTGGACGA TGTCGAGCAG ACGTGGCGTC GCTTCGTCGA GGACCCGCGA
GTCCGGGACA TCGTCGGTCC GAAGCTTGAC CGCGTCCCGG ACGCCGCCCG ACAGGAGATG
CCGTTCCCCG CGCTGACCGA GGCGGCACAC CCCGACCCGT TGCGGGCCGC GTTCGACGCA
TTGTGGGCCG CGAGCGCCGG ATCCGGTTGG CGGGACGTGT TCACCGAGGT GCGGGAGCGG
TTTCCGCGGC TTTCCGCCCC GCCGTTGCCA CCTGAGGAGC CGTCACGATC TCAGGTGTCG
ATGACGGTCG TGAGACGACG TGCCAGCGAC GAACCCCGAT GA
 
Protein sequence
MRTLFDGEFN VSYGQLYLDG RIDPDEGAEP DLDNCFMGQT VGLMGAAIPG HLFVLTGTHS 
GSVPLTVEVH ETEPSLDADA WEDVVEVSFE SDADEVALIE WDGDFQSLDL SPGSYRVRYL
CRGMDAASGH DRFDDDPVVD EYLLQFWPAP PQRDRIVKET SRSAAYWRRV AAEVPPPPSP
EEVAEAKRIA DERAAEKRRR YAERERWGEY SPSDRLRGLG GHVSKVAKRD PALAHATEAA
GPDVQRAIAC WAARRFCDAT GLSDVDWIAE GLSQLERGVP LSPPLDDVEQ TWRRFVEDPR
VRDIVGPKLD RVPDAARQEM PFPALTEAAH PDPLRAAFDA LWAASAGSGW RDVFTEVRER
FPRLSAPPLP PEEPSRSQVS MTVVRRRASD EPR