Gene Snas_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3239 
Symbol 
ID8884438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3418206 
End bp3419300 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512002 
Protein GI291300724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0144295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC ACCTGACAAC CGACATGAAA GCTCTGGCCG ATCGCGCCCG CACCGTCGAT 
CTGACCGAAC GCACCCACGC CACCGCGCGG CGGCTGCGCA CCACCCGCAT CGCCGTGGCC
GGGGTCGCGG CCCTGGCGTT GGCCGTGGGC ACCGGCGCGG TGTGGACGAC CACGGCACTG
CCGCAGGGCG GCAACGGTGT CCCGCCCGCG GCCTCGACCG ACCGTCTCAC CACCAAACTG
GACGGACGGT TCGTCTTCAC CCGGGGATCC GAGGTCGTCA CCTGGACCCC CGGCGGCGAT
CCCGAAGTGC TGGACGGCAT CGAGGATCCG AACCCCGAGA CGTTCCGGTT CAGCCCCGAC
GGCGTCCTGC TGAGCTACCT CGACCAGGAC GGCCAGCTGC ACGTCCACGA TGTCGCCGAC
GACGCGGAGA TCCGGGTGCC GGACCGCGAC ATCGTCGACG CCAGCGCCGA TCCGCCGGTG
TGGACCCCCG ACTCGCAGCG CCTGTGGATC GACACCGGCC GCGAGGAGGA CCGCTACGGC
TTCTACGACG TCGACTCCGG CGAGTTCACT CCCTCGCAGG AACCCGCCGG ACGCGACACC
GTGGTGGTGC GCTCCCCCGA CGGCGACGGC GAGATGTTGA TCAGCCTGCG CGAAGCCAGC
GACGGCAACG AACTGGTGTC GGTCACGCCC GACGGCGACG AACAGGTGCT GGCCGAAAGC
CCGGTGCAGG GCACCGGCGA GTACATCACC GACATCCTGT CCACCGATGT GGACGGTTCG
CGCATGTGTC TGGACACCAG TACCGACCAG ACGACCAACC CCGCCAAGCA CCCGACCTGC
CGGACCCTGC TGGCCTACGA CGACAAGGCG GCCGCCAACG TCGCGCCGGT CGCGACGCCG
CTGCTCGGCT GGATCGACGG CGACGAATCC GCCGACGCGA CGTCGGCCGC GCTCATCGCC
GGCTCCGGTC AGCGGGTGCA GCAGTTCGAC GACCGGGCCA CCCTCGTCAC CGGCGTCGAC
GAGGTCGTCG ACGAAGCGCC GCTGCCGGAC GAACTCACCG ACGGCGACCC CGAACTCGTG
GCCTACCAAC CCTAG
 
Protein sequence
MHDHLTTDMK ALADRARTVD LTERTHATAR RLRTTRIAVA GVAALALAVG TGAVWTTTAL 
PQGGNGVPPA ASTDRLTTKL DGRFVFTRGS EVVTWTPGGD PEVLDGIEDP NPETFRFSPD
GVLLSYLDQD GQLHVHDVAD DAEIRVPDRD IVDASADPPV WTPDSQRLWI DTGREEDRYG
FYDVDSGEFT PSQEPAGRDT VVVRSPDGDG EMLISLREAS DGNELVSVTP DGDEQVLAES
PVQGTGEYIT DILSTDVDGS RMCLDTSTDQ TTNPAKHPTC RTLLAYDDKA AANVAPVATP
LLGWIDGDES ADATSAALIA GSGQRVQQFD DRATLVTGVD EVVDEAPLPD ELTDGDPELV
AYQP