Gene Snas_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3179 
Symbol 
ID8884378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3360298 
End bp3360924 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511943 
Protein GI291300665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000569666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000536578 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGCTCG CCGACGAATG CTGGCTGGTC GCCCACGACG ACACCACCGG CGCGTCACTG 
CTGCCACCAC GCCTGGCCGG ACTCGCCGCC GCAGCCGGAC TCCTGTGCGA AATGGTCTAC
AACAAACGCC TGGCCATCAA CGGCAACCAG CCCACGCTAC GCGACCGTAC CCCCTCCCCC
GACCTGCTGC AACACACCAT CGCCGACCAC ATCGCCCGCG AAACCCACAC CATCGACACC
TGGCTGCGGT TCTTCGCCCG CACCGCCGAA GACGACATCG CCTCCCGGCT TTTGCGCCAC
GGCATCGTCG ACGAACAACA CACCCGCAAC CTCCTGGGAC GCAAACGCCG CCGCTTCGTG
CCCAAAGTGT CCACCGACGC CGCCTGGCCC GGCGCCCGCA TCGCCAAACG CCTCGCCCAA
GCCCGCCCCG TCGACGCCGT CGACCAGATC CTCATCGCCT GGATCGACGC CACCGGCCTG
ACACCCCACG TCCTGTGGGA CGACCCCGGC CACGTCGGCA CCCGCTACCT GCGCCACGTC
ATCACCCACC TGCCAGGCGA ATACCGCACC ATCATGGACA ACACCAGGCA CCTCGTCGGA
CAGATCATCA TGACCCACCA AACCTGA
 
Protein sequence
MLLADECWLV AHDDTTGASL LPPRLAGLAA AAGLLCEMVY NKRLAINGNQ PTLRDRTPSP 
DLLQHTIADH IARETHTIDT WLRFFARTAE DDIASRLLRH GIVDEQHTRN LLGRKRRRFV
PKVSTDAAWP GARIAKRLAQ ARPVDAVDQI LIAWIDATGL TPHVLWDDPG HVGTRYLRHV
ITHLPGEYRT IMDNTRHLVG QIIMTHQT