Gene Snas_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3106 
Symbol 
ID8884305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3277319 
End bp3278125 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003511870 
Protein GI291300592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.251532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.773597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGA CCGCCCACAC CCGACTGCAC TTCGCCGAAC ACGGCGAGGG CGTGCCCGTA 
CTCGCCGTCC ACGGCTGGAC CCCGGACCAC CGTCTGATGA CCGGCTGCCT GGAGCCGGTG
TTCGCTCAGC GGCCCGGTTA CCGGCGGCTG TACCCGGATC TGCCGGGGAT GGGCAAGAGT
CCGGCACCGG AGTCGGTGGC CTCGTCGGAC GACGTCCTGG CCGCGCTCGA GGCCTTCGTC
GACGAGCACA TCGGCACCGA ACCGTTCCTC CTCATCGGAG AGTCGTATGG CGGTTACCTG
AGCCGGGCCA TCGCGTGCGC CCGGCCACAG CAGGTGCTGG GACTGGGGTT GATCTGCCCG
ATCGGTGCGA TCGTGCCCCG CGCCGAACGC GACGTGCCGC CGCACACCGT GGTGGTGTCC
GATCCGGAGT TGATCGCGTC GCTGTCGGGG CCCGACACCG ACTTCGCCGA GATCGCGGTG
GTGCAGGACG CCGAGTCGCT GCGGCGGTTC CGTGAGGACG TGGCGCCCGG TCTGGCGCTG
ACCGACACCG CCGCCGTGGA ACGGATCGGG CGGCGCTGGG AGCTGAGCAC CTCCCCTGAG
GCGCGCGGCC GTTTCGAACG GCCGACGTTG ATCCTCACCG GGCGGCAGGA CTCCTCGACC
GGGTACGCCG ACGTCTATCG GCTGCTGGAC GACTATCCGC GCGCTTCCTT CGCGATCCTC
GACCGCGCCG GTCACAACCT GCAGATCGAG CAACCGCGGC TATTCGCGGC CCTCGTCGGG
GAGTGGCTGG ACCGGGTGTC CGAGTAA
 
Protein sequence
MSTTAHTRLH FAEHGEGVPV LAVHGWTPDH RLMTGCLEPV FAQRPGYRRL YPDLPGMGKS 
PAPESVASSD DVLAALEAFV DEHIGTEPFL LIGESYGGYL SRAIACARPQ QVLGLGLICP
IGAIVPRAER DVPPHTVVVS DPELIASLSG PDTDFAEIAV VQDAESLRRF REDVAPGLAL
TDTAAVERIG RRWELSTSPE ARGRFERPTL ILTGRQDSST GYADVYRLLD DYPRASFAIL
DRAGHNLQIE QPRLFAALVG EWLDRVSE