Gene Snas_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3080 
Symbol 
ID8884279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3251113 
End bp3252381 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511844 
Protein GI291300566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.171333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.411127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCA GACCCCGAAC CATCATCGCG GCCGTCGCTG TCCTCGGCAC GGCGACCGCG 
GTGGCCGCGT TCACGATCCC GGCATCCGCG GACGACAACG GCGAGAAGGT CACCGAGTCC
CACGAGGTCT TCTCCCCCAA CGGGGACATC GACCGCAAGA AGGTCACCCG CGAGGTGAAG
GACGACCCGG CGCCGCGCTC GACGGTCAGG AAGGCCGAGG TCGTCCCGAT CCTCGACAAC
GGCCCCACCG AGGAGAAGCT CGACATCGTC GTCGTCGGCG ACGGCTACAC CGAGGCCGAC
ATGGCCACCT ACGAGGAACA CACCCGCTCC AAGATGGACG AAGTGTTCGC CGTCGAGCCC
TTCAAGAGCT ACAAGGACCA GTTCAACGTC TGGATGGTCA AGGTCGTCTC CAAGGAGTCC
GGCGTCGACC ACGACCCGCA GGGGACCCTG CGCGACACCG CCCTGGACAT GGAGTTCTGG
TGCGGCGACA CCGAACGGCT GCTGTGCGTC AACACCACCA AGGCCAAGCA GTACGCCGCC
GAGGCCCCCG ACGTCGACCA GGTGCTGGCG CTGGGCAACT CCACCAAGTA CGGCGGCGCC
GGTTACCCGA GCGAGGACGT CGGCACCTCC TCGGGCGGCA ACGAGCAGGC CGGTCAGGTC
GTGGTACACG AGTTCGGGCA CTCCATCGGT GACCTCGCCG ACGAGTACAC CTACGGCGGC
GGCGACACCT ACACCGGCCC CGAGGTCGGC GAGGTGAACG CTTCCATCAA GGACCGTGCC
ACCCAGGAGT CCGAGAAGGT CAAGTGGCAC CAGTGGATGG GCGAGGAGAC CCCCGACGGC
GGCACCATCG ACACCTACGA CGGTTGCCGC TACTACGAAC ACGGGATCTT CCGGCCCAGC
GACAACTCGA TCATGCGGGA ACTGGGCCGC GAGTTCAACC TGCCCGGCCG CGAGGCCATG
ATCGGCGCGT TCCACGACTC GGCGGCGGTC GCGTCCCCGA CGGTGCCCAC CAAGCAGAAA
GTCGCCGTCG GTGAGGAACT GGGTCTGGAA CTGCCCGACG TCCACGGCGA CCACACCATC
GAGTGGAAAG TGGACGGCAA GGTGGTGAAG TCCGCGTCCG GCAAGACAAG CCTCGACACC
GGCGGACTGA AACTGGACTC CGGCAAACAC GAGGTCAGCG TGACTGTCAC CGACACCACC
GACTGGGTGC GGGACGAGAA ACTGCGCGCC GACAACCTCA CCGACACGTT CACGTGGACG
GTGGCTTGA
 
Protein sequence
MRFRPRTIIA AVAVLGTATA VAAFTIPASA DDNGEKVTES HEVFSPNGDI DRKKVTREVK 
DDPAPRSTVR KAEVVPILDN GPTEEKLDIV VVGDGYTEAD MATYEEHTRS KMDEVFAVEP
FKSYKDQFNV WMVKVVSKES GVDHDPQGTL RDTALDMEFW CGDTERLLCV NTTKAKQYAA
EAPDVDQVLA LGNSTKYGGA GYPSEDVGTS SGGNEQAGQV VVHEFGHSIG DLADEYTYGG
GDTYTGPEVG EVNASIKDRA TQESEKVKWH QWMGEETPDG GTIDTYDGCR YYEHGIFRPS
DNSIMRELGR EFNLPGREAM IGAFHDSAAV ASPTVPTKQK VAVGEELGLE LPDVHGDHTI
EWKVDGKVVK SASGKTSLDT GGLKLDSGKH EVSVTVTDTT DWVRDEKLRA DNLTDTFTWT
VA