Gene Snas_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3075 
Symbol 
ID8884274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3244960 
End bp3246537 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511839 
Protein GI291300561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.755728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.783415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGCCG CGGACGGCAC GGCGATCCTG GACGACTCGA CACTGACCTT CGAGTTCACC 
GCCAGCGGCT GGCGGCAACC GTTCAAAGCG GCCGTGGGCC AGCGAGTGTT TCCACTGGAC
GCCATCGATG ACGTCACCTA CAAAGTGCCG GGAAGGGTCC GTAATGGATC AGTCTCGTTG
AAGCTCAAAC AGGGAAGAGA CAACCTGCGG GAGTTTCTCA AGGACGACAA GCCGTCGGAC
AGCATGGACC CCGATTGTCT GGTGATCGCC CCCGAACAGG CGGCATATGC CGAGTTGTTC
GTGGCACGCC TGCGCAACGT CATCGTCCAG GCTGCCGCCT CCGACCGCCC GGTGACAACC
GGAACGCTAC CGATCGAGCT GAAAGGATCG GACGGCACAG CCTTCTTCGA CGGTCACCAC
CTGTACCTGG AGTTCAGTGG CTGGACCACC GACCGGGCGA AGAAGGACCT CGGTGGTCGG
TCGGTACCGG TCACCGCGAT TCGGGGCGTA CAGGTCCGCC ACCCCGGCAT GAGCGGCTGG
ATCCGGTTCG TACCGGTCGA AGGACCGCCC CGGTCGGACC TGTCACCAAC CCAAGACCCG
CATACGCTGT GCCTGAACGC GGACGCCGCC AGCCGATACG TCATCTTCGC CGCAGCGGTA
GCGCGGGCAC TACCCCGACA GCCGCTTTCG GCCGCAGAGC ATTCGCCGAA GGCCGCACCG
AACAAACCCA AACCCAAGCC CGCTCCCGCA CCATCGCCGC CCCATGGTGC TACGACGGTG
ATCCCGATGC TTTCTCTGAG CCGTGAAGTG GCATTGACGC ACTCGTCAGG GCTGCGCCTT
CGCCGTCTGC CGACAGGAGG CGAACGGGTC GAGGTGGTGG GGGAGTCCTA CTACCAACCC
GCACTGCGAA CCGTCGCCGA AGGCAGAACC GTCGCGCCCG GGGCACTGGG CGACGCGATC
GAGGCCATCG CCGTGCTGGT GCCCGAACCG CACAACCGCT ACGACTCGAA AGCAGTGCGC
ATCGATCTGC TCGACAAACG CGGAAAGCCG CACAAAGCCG GATACCTGCC CCGCTATCTC
GCGGCGACCT GCCACGATGA CTTGGCGCGC ATGGGAAAGG AGTTCGGTTA CTGCCCGGCG
AGGATCATGG GCGGCGGACG AGGGCGCTCA TACGGGGTAC ACCTGCACCT CAGCCTGGAC
GTCATCCGAC CATTTCGGAA TCCCCATACG ACCGGCTTCC TGCTGCACCC TGACCGCCAG
GTCACCGTCA CCAAGGAGCA CTCCCACCAA GCGGTCCTGT CCCGGTTCGC GCCAGGACCC
GATGAGCCAC GCGCGTGGGT CATGGCGGAA CTGTCCCTGG TGGGGATCAC CTCCGGCAAA
TATCGCGGCG AGCAAGCCAT CGAGGTGAGC CTCGACGGAG AGCGGGTCGG TGAGACCACC
CGCAACCAGG CACGATATTA CGAACGCTTC GTTCGCGAGA TCCGCGCCGA TGGCGGGCAG
GCGCTCTGCG AGGGCTACGT GTACCCCAAG AACGGCGAGC AACTGGAGGT CGAGTTGTTC
CTGCCGAAAC CAGGTTGA
 
Protein sequence
MAAADGTAIL DDSTLTFEFT ASGWRQPFKA AVGQRVFPLD AIDDVTYKVP GRVRNGSVSL 
KLKQGRDNLR EFLKDDKPSD SMDPDCLVIA PEQAAYAELF VARLRNVIVQ AAASDRPVTT
GTLPIELKGS DGTAFFDGHH LYLEFSGWTT DRAKKDLGGR SVPVTAIRGV QVRHPGMSGW
IRFVPVEGPP RSDLSPTQDP HTLCLNADAA SRYVIFAAAV ARALPRQPLS AAEHSPKAAP
NKPKPKPAPA PSPPHGATTV IPMLSLSREV ALTHSSGLRL RRLPTGGERV EVVGESYYQP
ALRTVAEGRT VAPGALGDAI EAIAVLVPEP HNRYDSKAVR IDLLDKRGKP HKAGYLPRYL
AATCHDDLAR MGKEFGYCPA RIMGGGRGRS YGVHLHLSLD VIRPFRNPHT TGFLLHPDRQ
VTVTKEHSHQ AVLSRFAPGP DEPRAWVMAE LSLVGITSGK YRGEQAIEVS LDGERVGETT
RNQARYYERF VREIRADGGQ ALCEGYVYPK NGEQLEVELF LPKPG